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PROTINUS

PROviding new insighT into INteractions between soil fUnctions and Structure

Total Cost €

EC-Contrib. €

Partnership

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Outcomes and
results

PROTINUS project word cloud

Explore the words cloud of the PROTINUS project. It provides you a very rough idea of what is the project "PROTINUS" about.

techniques synergies chemistry unified services team first methodology root 3d international practical soil overseas disciplines filtering experimental creation institutes cornerstone microbiological partnering create dynamic storage meant local expertise predicting shared database disciplinary theory models impacts modify contaminant analysing network infrastructure image combine experiments model structure protinus practises ecosystems outcomes look final physics bio imaging samples sustainable theoretical explored collaborations databases data standard carbon interactions area renders perform science reconstruct stage modern assembles bilateral functions practise diversity

Project "PROTINUS" data sheet

The following table provides information about the project.

Coordinator	INSTITUT DE RECHERCHE POUR LE DEVELOPPEMENT Organization address address: BOULEVARD DE DUNKERQUE 44 CS 90009 city: MARSEILLE postcode: 13572 website: www.ird.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.
Coordinator Country	France [FR]
Project website	http://www.protinus.ird.fr
Total cost	459˙000 €
EC max contribution	175˙500 € (38%)
Programme	1. H2020-EU.1.3.3. (Stimulating innovation by means of cross-fertilisation of knowledge)
Code Call	H2020-MSCA-RISE-2014
Funding Scheme	MSCA-RISE
Starting year	2015
Duration (year-month-day)	from 2015-01-01 to 2018-12-31

Partnership

Take a look of project's partnership.

#	participants	country	role	EC contrib. [€]
1	INSTITUT DE RECHERCHE POUR LE DEVELOPPEMENT INSTITUT DE RECHERCHE POUR LE DEVELOPPEMENT Organization address address: BOULEVARD DE DUNKERQUE 44 CS 90009 city: MARSEILLE postcode: 13572 website: www.ird.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (MARSEILLE)	coordinator	36˙000.00
2	UNIVERSITE DE LORRAINE UNIVERSITE DE LORRAINE Organization address address: COURS LEOPOLD 34 city: NANCY CEDEX postcode: 54052 website: www.univ-lorraine.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (NANCY CEDEX)	participant	45˙000.00
3	UNIVERSITA DEGLI STUDI DI PADOVA UNIVERSITA DEGLI STUDI DI PADOVA Organization address address: VIA 8 FEBBRAIO 2 city: PADOVA postcode: 35122 website: www.unipd.it contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	IT (PADOVA)	participant	27˙000.00
4	AARHUS UNIVERSITET AARHUS UNIVERSITET Organization address address: NORDRE RINGGADE 1 city: AARHUS C postcode: 8000 website: www.au.dk contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DK (AARHUS C)	participant	22˙500.00
5	UNIVERSITE GRENOBLE ALPES UNIVERSITE GRENOBLE ALPES Organization address address: 621, AVENUE CENTRALE city: SAINT MARTIN D'HERES postcode: 38401 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (SAINT MARTIN D'HERES)	participant	22˙500.00
6	AALBORG UNIVERSITET AALBORG UNIVERSITET Organization address address: FREDRIK BAJERS VEJ 7K city: AALBORG postcode: 9220 website: www.aau.dk contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DK (AALBORG)	participant	9˙000.00
7	CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS Organization address address: RUE MICHEL ANGE 3 city: PARIS postcode: 75794 website: www.cnrs.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (PARIS)	participant	9˙000.00
8	NOVITOM SAS NOVITOM SAS Organization address address: 1 PLACE FIRMIN GAUTIER city: GRENOBLE postcode: 38000 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (GRENOBLE)	participant	4˙500.00
9	NATIONAL UNIVERSITY CORPORATION KUMAMOTO UNIVERSITY NATIONAL UNIVERSITY CORPORATION KUMAMOTO UNIVERSITY Organization address address: 2-39-1 KUROKAMI city: CHUO KU KUMAMOTO postcode: 8608555 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	JP (CHUO KU KUMAMOTO)	partner	0.00
10	SAITAMA UNIVERSITY SAITAMA UNIVERSITY Organization address address: 255 SHIMO OKUBO city: SAKURA KU SAITAMA postcode: 338 8570 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	JP (SAKURA KU SAITAMA)	partner	0.00
11	THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED Organization address address: MOUNT ALBERT ROAD 120 MOUNT ALBERT RESEARCH CENTRE city: AUCKLAND postcode: 1025 website: www.hortresearch.co.nz contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	NZ (AUCKLAND)	partner	0.00
12	THE UNIVERSITY OF AUCKLAND THE UNIVERSITY OF AUCKLAND Organization address address: PRINCES STREET 24 city: AUCKLAND postcode: 1010 website: www.auckland.ac.nz contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	NZ (AUCKLAND)	partner	0.00
13	UNIVERSIDAD NACIONAL AUTONOMA DE MEXICO UNIVERSIDAD NACIONAL AUTONOMA DE MEXICO Organization address address: TORRE DE RECTORIA 9º. PISO, CIUDAD UNIVERSITARIA, D.F. city: MEXICO DISTRITO FEDERAL postcode: 4510 website: www.unam.mx contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	MX (MEXICO DISTRITO FEDERAL)	partner	0.00

Map

Project objective

The PROTINUS proposal assembles a multi-disciplinary team to combine advanced, applied and theoretical research to create a new standard in imaging, analysing, modelling and predicting the interactions between soil structure and soil functions. Soil structure impacts a whole range of services soil renders to ecosystems, including for example contaminant filtering, carbon storage, root growth, and microbiological diversity.

By using modern imaging, image analysis and modelling techniques, we will develop an integrated approach to perform experiments in soil physics, bio-chemistry, to reconstruct soil structure in 3D and to model soil processes. The evaluated models will be used for predicting the different services soil renders to ecosystems in a dynamic way and for testing classical theory, where soil structure is not directly taken into account. To do so we will bring together the theoretical and practical expertise of the involved researchers, infrastructure of the partnering institutes, soil samples and databases.

The first stage will investigate today’s best practise in experimental soil science and imaging, data analysis and modelling. Our findings will enable our second stage approach where synergies between the different disciplines will be explored. The third stage will provide the cornerstone of a new unified methodology meant to modify practise and outcomes of current experimental/imaging, analysis and modelling approaches. Our final stage will look at the changes brought to each of the specific research area’s practises and how it impacts the understanding of soil structure and its functions.

It is expected that our proposal will foster bilateral collaborations within Europe and with our overseas partners through local and international funding, shared database and infrastructure management, and lead to the creation of a sustainable international network of researchers, infrastructure and institutes.

Deliverables

List of deliverables.
Summer School in Grenoble	Other	2019-06-05 14:14:11
winter School Padova	Other	2019-06-05 14:14:11
WP5 and Final report	Documents, reports	2019-06-05 14:14:11
WP4 Report	Documents, reports	2019-06-05 14:14:11
Progress report - 2	Documents, reports	2019-06-05 14:14:11
MSc courses in Auckland/Grenoble/ Mexico	Other	2019-06-05 14:14:11
Workshop in Japan	Other	2019-06-05 14:14:11
Work package work plan WP5	Documents, reports	2019-06-05 14:14:11
Work plan for WP3	Documents, reports	2019-06-05 14:14:10
Implement an online dissemination infrastructure	Websites, patent fillings, videos etc.	2019-06-05 14:14:10
Work package work plan for WP2	Documents, reports	2019-06-05 14:14:11
Workshop Auckland	Other	2019-06-05 14:14:10
Summer school Grenoble	Other	2019-06-05 14:14:10
Work package work plan WP4	Documents, reports	2019-06-05 14:14:10
Progress report -1	Documents, reports	2019-06-05 14:14:11
WP2 Report	Documents, reports	2019-06-05 14:14:10
WP3 Report	Documents, reports	2019-06-05 14:14:10
Workshop in New Zealand	Documents, reports	2019-06-05 14:14:10
Workshop Grenoble	Other	2019-06-05 14:14:11

Take a look to the deliverables list in detail: detailed list of PROTINUS deliverables.

Publications

List of publications.
year	authors and title	journal	last update
2019	Karin MÃ¼ller, CÃ©line Duwig, Anne-Julie Tinet, Alfonso Gastelum Strozzi, Lorenzo Spadini, Marie Christine Morel, Pascal Charrier Orchard management and preferential flow in Andosols â€“ comparing two kiwifruit orchards in New Zealand published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18293	Soil Research	2019-10-08
2019	MÃ¼ller K., N. Dal Ferro, S. Katuwal, C. Tregurtha, F. Zanini, S. Carmignato, L.Wollesen de Jonge, P. Moldrup: F. Morari Effect of long-term irrigation and cultivation practices on X-ray CT and gas transport derived pore-network characteristics published pages: , ISSN: , DOI:	NZ Soil Science Society Conference - Diverse soils, productive landscapes, Napier. 3-6 December 2018	2019-10-08
2019	Hermansen C, Moldrup P, MÃ¼ller K, Knadel M, Greve MH, Wollesen de Jonge L Predicting Glyphosate Sorption across New Zealand Pastoral Soils Using Basic Soil Properties and Visâ€“NIR Spectroscopy published pages: , ISSN: , DOI:	International Soils Meeting, January 6-9, 2019, San Diego, CA	2019-10-08
2019	M. Benioug, F. Golfier, P. Fischer, C. Oltean, M.A. BuÃ¨s, X. Yang Interaction between biofilm growth and NAPL remediation: A pore-scale study published pages: 82-97, ISSN: 0309-1708, DOI: 10.1016/j.advwatres.2019.01.011	Advances in Water Resources 125	2019-10-08
2018	Robert M Simpson, Karen Mason, Kyle Robertson, Karin MÃ¼ller Relationship between Soil Enzyme Activities and Properties with Soil Water Repellency published pages: , ISSN: , DOI:	NZ Soil Science Society Conference - Diverse soils, productive landscapes, Napier. 3-6 December 2018	2019-10-08
2019	Cecilie Hermansen, Per Moldrup, Karin MÃ¼ller, Peter Weber Jensen, Carlo van den Dijssel, Paramsothy Jeyakumar, Lis W. de Jonge Organic carbon content controls the severity of water repellency and the critical moisture level across New Zealand pasture soils published pages: 281-290, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2018.12.007	Geoderma 338	2019-10-08
2018	Karin Mï¿½ller, Nicola Dal Ferro, Sheela Katuwal, Craig Tregurtha, Filippo Zanini, Simone Carmignato, Lis Wollesen de Jonge, Per Moldrup, Francesco Morari Effect of long-term irrigation and tillage practices on X-ray CT and gas transport derived pore-network characteristics published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18210	Soil Research	2019-10-08
2019	Erika Shiota, Toshifumi Mukunoki, Laurent Oxarango, Anne-Julie Tinet, Fabrice Golfier Micro- and macro-scale water retention properties of granular soils: contribution of the X-Ray CT-based voxel percolation method published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18179	Soil Research	2019-10-08
2017	I. Picoli, N. Dal Ferro, A. Squartini, P. Delmas, A. Berti, F. Morari X-ray computed microtomography on contrast-enhanced soil samples as aproxy for soil organic matter and microorganisms interactions study published pages: , ISSN: , DOI:	42Â° Confresso Nazionale, Il Suolo al servizio degli ecosistemi	2019-10-08
2018	Karin MÃ¼ller, Karen Mason, Alfonso Gastelum Strozzi, Robert Simpson, Toshiko Komatsu, Ken Kawamoto, Brent Clothier Runoff and nutrient loss from a water-repellent soil published pages: 28-37, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2018.02.019	Geoderma 322	2019-06-05
2018	Alfonso Gastelum Strozzi, CÃ©line Duwig, Patrice Delmas, Laurent Oxarango, Blanca Prado, Jorge Marquez 3D imaged soil pore morphology and SPH simulated water flow published pages: EGU2018-12390, ISSN: , DOI:	European Geosciences Union General Assembly 2018 Vol. 20	2019-06-05
2018	Karin MÃ¼ller, Nicola Dal Ferro, Craig Tregurtha, Filippo Zanini, Simone Carmignato, Francesco Morari Carbon content and pore network of a silt loam soil under differentagricultural management practices published pages: EGU2018-12509, ISSN: , DOI:	European Geosciences Union General Assembly 2018 Vol 20	2019-06-05
2019	Hermansen C, Moldrup P, MÃ¼ller K, Knadel M, Greve MH, Wollesen de Jonge L The Relation between Soil Water Repellency and Water Content can be Predicted by Visâ€“NIR Spectroscopy published pages: , ISSN: , DOI:	International Soils Meeting, January 6-9, 2019, San Diego, CA	2019-06-05
2018	T. Bahar, F. Golfier, C. OltÃ©an, E. Lefevre, C. Lorgeoux Comparison of theory and experiment for NAPL dissolution in porous media published pages: 49-64, ISSN: 0169-7722, DOI: 10.1016/j.jconhyd.2018.03.004	Journal of Contaminant Hydrology 211	2019-06-05
2018	Karin MÃ¼ller, Sheela Katuwal, Iain Young, Malcolm McLeod, Per Moldrup, Lis Wollesen de Jonge, Brent Clothier Characterising and linking X-ray CT derived macroporosity parameters to infiltration in soils with contrasting structures published pages: Pages 82â€“91, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2017.10.020	Geoderma Volume 313	2019-06-05
2016	E. Shiota, L. Oxarango, L. Chang, P. Delmas, T. Mukunoki Analysis of unsaturated properties of a sandy soil using X-Ray CT published pages: , ISSN: , DOI:	. JEMP (JournÃ©es dâ€™Etude des Milieux Poreux), Biarritz, France, 12-14 October 2016	2019-06-05
2016	J. Wu, A-J. Tinet, L. ScholtÃ¨s, M.A. BuÃ¨s Comparative study of five boundary treatment schemes for stationary complex boundaries in the lattice Boltzmann method published pages: , ISSN: , DOI:	JEMP (JournÃ©es dâ€™Etude des Milieux Poreux), Biarritz, France, 12-14 October 2016	2019-06-05
2015	N. Dal Ferro, F. Morari From Real Soils to 3D-Printed Soils: Reproduction of Complex Pore Network at the Real Size in a Silty-Loam Soil published pages: 1008, ISSN: 0361-5995, DOI: 10.2136/sssaj2015.03.0097	Soil Science Society of America Journal 79/4	2019-06-05
2015	N. Dal Ferro, A.G. Strozzi, C. Duwig, P. Delmas, P. Charrier, F. Morari Application of smoothed particle hydrodynamics (SPH) and pore morphologic model to predict saturated water conductivity from X-ray CT imaging in a silty loam Cambisol published pages: 27-34, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2015.04.019	Geoderma 255-256	2019-06-05
2015	Z. Peng, C. Duwig, P. Delmas, J. P. Gaudet, A. Gastelum Strozzi, P. Charrier, H. Denis Visualization and Characterization of Heterogeneous Water Flow in Double-Porosity Media by Means of X-ray Computed Tomography published pages: 543-564, ISSN: 0169-3913, DOI: 10.1007/s11242-015-0572-z	Transport in Porous Media 110/3	2019-06-05
2017	Piccoli I., Dal Ferro N., Delmas P., Squartini A., Berti A., Morari F. Study of spatiotemporal soil organic matter dynamics using X-ray Î¼CT and contrast agent published pages: , ISSN: , DOI:	6th International Symposium on Soil Organic Matter	2019-06-05

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