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AdOMiS SIGNED

Adaptive Optical Microscopy Systems: Unifying theory, practice and applications

Total Cost €

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EC-Contrib. €

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Partnership

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 AdOMiS project word cloud

Explore the words cloud of the AdOMiS project. It provides you a very rough idea of what is the project "AdOMiS" about.

diversity    specimen    optical    microscopy    types    tie    fluorescence    caused    cellular    structures    accepted    labeling    place    suffer    variations    optimum    suite    biological    operation    sciences    tool    capability    individual    scientific    creation    solutions    rely    met    dynamics    practical    bespoke    biomedical    additional    possibilities    shown    fundamental    fidelity    virtually    frameworks    molecular    prevents    protocols    software    translatable    tools    resolution    encompasses    microscopes    toolkit    shows    directed    investigation    commercial    optimal    overcome    coupled    routine    adaptive    sensitivity    ao    vastly    progress    enabled    tissue    engineering    index    algorithms    microscope    environment    made    diverse    efficiency    generation    optics    broad    promise    limits    limitations    outputs    technological    unprecedented    central    correcting    designs    demonstrations    theoretical    recent    refractive    imaging    aberrations    permit    observation    broadened   

Project "AdOMiS" data sheet

The following table provides information about the project.

Coordinator
THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD 

Organization address
address: WELLINGTON SQUARE UNIVERSITY OFFICES
city: OXFORD
postcode: OX1 2JD
website: www.ox.ac.uk

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country United Kingdom [UK]
 Total cost 3˙234˙789 €
 EC max contribution 3˙234˙789 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2015-AdG
 Funding Scheme ERC-ADG
 Starting year 2016
 Duration (year-month-day) from 2016-09-01   to  2021-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD UK (OXFORD) coordinator 3˙234˙789.00

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 Project objective

Recent technological advances in optical microscopy have vastly broadened the possibilities for applications in the biomedical sciences. Fluorescence microscopy is the central tool for investigation of molecular structures and dynamics that take place in the cellular and tissue environment. Coupled with progress in labeling methods, these microscopes permit observation of biological structures and processes with unprecedented sensitivity and resolution. This work has been enabled by the engineering development of diverse optical systems that provide different capabilities for the imaging toolkit. All such methods rely upon high fidelity optics to provide optimal resolution and efficiency, but they all suffer from aberrations caused by refractive index variations within the specimen. It is widely accepted that in many applications this fundamental problem prevents optimum operation and limits capability. Adaptive optics (AO) has been introduced to overcome these limitations by correcting aberrations and a range of demonstrations has shown clearly its potential. Indeed, it shows great promise to improve virtually all types of research or commercial microscopes, but significant challenges must still be met before AO can be widely implemented in routine imaging. Current advances are being made through development of bespoke AO solutions to individual imaging tasks. However, the diversity of microscopy methods means that individual solutions are often not translatable to other systems. This proposal is directed towards the creation of theoretical and practical frameworks that tie together AO concepts and provide a suite of scientific tools with broad application. This will be achieved through a systems approach that encompasses theoretical modelling, optical engineering and the requirements of biological applications. Additional outputs will include practical designs, operating protocols and software algorithms that will support next generation AO microscope systems.

 Publications

year authors and title journal last update
List of publications.
2019 Mantas Žurauskas, Ian M. Dobbie, Richard M. Parton, Mick A. Phillips, Antonia Göhler, Ilan Davis, Martin J. Booth
IsoSense: frequency enhanced sensorless adaptive optics through structured illumination
published pages: 370, ISSN: 2334-2536, DOI: 10.1364/optica.6.000370
Optica 6/3 2019-09-04
2019 Raphaël Turcotte, Carla C. Schmidt, Nigel J. Emptage, Martin J. Booth
Focusing light in biological tissue through a multimode optical fiber: refractive index matching
published pages: 2386, ISSN: 0146-9592, DOI: 10.1364/ol.44.002386
Optics Letters 44/10 2019-09-04
2019 Yuanyuan Dai, Jacopo Antonello, Martin J. Booth
Calibration of a phase-only spatial light modulator for both phase and retardance modulation
published pages: 17912, ISSN: 1094-4087, DOI: 10.1364/oe.27.017912
Optics Express 27/13 2019-09-04
2017 Bangshan Sun, Patrick S Salter, Clemens Roider, Alexander Jesacher, Johannes Strauss, Johannes Heberle, Michael Schmidt, Martin J Booth
Four-dimensional light shaping: manipulating ultrafast spatiotemporal foci in space and time
published pages: 17117, ISSN: 2047-7538, DOI: 10.1038/lsa.2017.117
Light: Science & Applications 7/1 2019-06-13
2017 Xiang Hao, Jacopo Antonello, Edward S. Allgeyer, Joerg Bewersdorf, Martin J. Booth
Aberrations in 4Pi Microscopy
published pages: 14049, ISSN: 1094-4087, DOI: 10.1364/OE.25.014049
Optics Express 25/13 2019-06-13
2017 Mantas Žurauskas, Oliver Barnstedt, Maria Frade-Rodriguez, Scott Waddell, Martin J. Booth
Rapid adaptive remote focusing microscope for sensing of volumetric neural activity
published pages: 4369, ISSN: 2156-7085, DOI: 10.1364/BOE.8.004369
Biomedical Optics Express 8/10 2019-06-13
2018 Bing Dong, Martin J. Booth
Wavefront control in adaptive microscopy using Shack-Hartmann sensors with arbitrarily shaped pupils
published pages: 1655, ISSN: 1094-4087, DOI: 10.1364/OE.26.001655
Optics Express 26/2 2019-06-13

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