Opendata, web and dolomites

ivMX

Development of the new generation of structural biology by coupling in vivo crystallography to intense x-ray sources

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 ivMX project word cloud

Explore the words cloud of the ivMX project. It provides you a very rough idea of what is the project "ivMX" about.

handling    insights    alone    bacteria    involve    structures    emergence    primary    crystals    prior    motivated    give    characterisation    micron    patterns    small    handled    plants    organisms    mammals    proteins    details    reducing    tedious    diverse    opened    costly    consuming    mostly    platform    generation    atomic    diffraction    external    uncontrollable    fungi    intends    obtain    protein    biology    ray    macromolecular    sub    recombinantly    protists    advantage    occurring    inside    crystallography    biological    expressed    purification    complicated    took    phenomena    amphibians    dictating    readily    cells    gives    reasonable    interpretable    naturally    stands    collecting    hosts    deciphering    sources    easily    mx    structure    insects    events    time    structural    intense    preparation    synchrotron    lies    restricted    unreachable    ligands    bottleneck    coherent    ivmx    macromolecules    crystal    coupled    implications    functions    identification    requirement    pipelines    fishes    medical    window    vivo    quantities    samples    initiated    sizes    decipher   

Project "ivMX" data sheet

The following table provides information about the project.

Coordinator
SYNCHROTRON SOLEIL SOCIETE CIVILE 

Organization address
address: L ORME DES MERISIERS
city: SAINT AUBIN
postcode: 91190
website: http://www.synchrotron-soleil.fr/

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Project website https://www.synchrotron-soleil.fr/fr/lignes-de-lumiere/proxima-1
 Total cost 185˙076 €
 EC max contribution 185˙076 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2015
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2016
 Duration (year-month-day) from 2016-09-01   to  2018-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    SYNCHROTRON SOLEIL SOCIETE CIVILE FR (SAINT AUBIN) coordinator 185˙076.00

Map

 Project objective

Mostly motivated by, but not restricted to the comprehensive analysis and understanding of biological phenomena with potential medical implications, structural biology gives access to the atomic details of macromolecules, allowing to decipher their biological functions. Using state-of-the-art developments coupled to third-generation x-ray synchrotron sources, macromolecular x-ray crystallography (MX) stands as the primary method for determining the structures of proteins, alone or in complex with partner ligands. The major bottleneck of MX lies in the requirement to obtain crystals of reasonable sizes that can easily by handled and readily give rise to interpretable diffraction patterns. Prior to x-ray diffraction studies, crystal production pipelines involve the characterisation, purification and handling of samples in large quantities through multi-step, complicated, time-consuming and costly procedures.

The identification of protein crystals naturally occurring inside cells and organisms as diverse as bacteria, protists, fungi, plants, fishes, amphibians, insects and mammals has opened a window for a new type of MX and structural biology. Recently, the emergence of the in vivo crystallography (ivMX) approach took advantage in the developments of new intense coherent x-ray sources that allow collecting diffraction patterns from sub-micron crystals, targets so far unreachable at other x-ray sources. This proposal intends to get further insights into the yet uncontrollable events dictating in vivo crystal growth, by structure determination and analysis of readily available ivMX systems. While deciphering these phenomena and applying them to external proteins recombinantly expressed in hosts where in vivo crystal growth could be identified, a small platform for ivMX will be initiated, with the aim of reducing the tedious and costly sample preparation steps currently used in MX.

 Publications

year authors and title journal last update
List of publications.
2017 Pierre Montaville, Leonard Chavas
De novo in-vivo protein crystal structure: is experimental phasing required?
published pages: C878, ISSN: , DOI:
Acta Cryst A73 2019-05-27
2017 Charline J. J. Gerard, Gilles Ferry, Laurent M. Vuillard, Jean A. Boutin, Leonard M. G. Chavas, Tiphaine Huet, Nathalie Ferte, Romain Grossier, Nadine Candoni, Stéphane Veesler
Crystallization via tubing microfluidics permits both in situ and ex situ X-ray diffraction
published pages: 574-578, ISSN: 2053-230X, DOI: 10.1107/S2053230X17013826
Acta Crystallographica Section F Structural Biology Communications 73/10 2019-05-27
2018 Sanchari Banerjee, Pierre Montaville, Leonard M. G. Chavas, S. Ramaswamy
The New Era of Microcrystallography
published pages: 273-281, ISSN: 0019-4964, DOI: 10.1007/s41745-018-0086-0
Journal of the Indian Institute of Science 98/3 2019-05-27

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "IVMX" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "IVMX" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.3.2.)

RipGEESE (2020)

Identifying the ripples of gene regulation evolution in the evolution of gene sequences to determine when animal nervous systems evolved

Read More  

5G-ACE (2019)

Beyond 5G: 3D Network Modelling for THz-based Ultra-Fast Small Cells

Read More  

DEF2DEV (2019)

Identification of the mode of action of plant defensins during root development and plant defense responses.

Read More