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MetaRNA project deliverables

The page lists 22 deliverables related to the research project "MetaRNA".

 List of Deliverables

MetaRNA: list of downloadable deliverables.
title and desprition type last update

Secondary structure of aptamers in vivo

Secondary structure of a selected set of metabolite-sensing aptamers both in vitro and in vivo

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Fluxes through the yeast cell cycle quantified

Fluxes through the yeast cell cycle quantified

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Methodology to optimize RNA-based sensors

Description of methodologies for the computational design and directed evolution of RNA-based sensors

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Highest producing E.coli strains

Selection (using RNA-based sensor) and biochemical characterization of highest producing E.coli strains following combinatorial metabolic engineering

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Other 2020-02-20

Cellular and in vivo delivery of RNA-based sensor

Protocol for efficient in vitro cellular and in vivo delivery of RNA-based sensors

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Characterisation of normal liver & liver tumour metabolic heterogeneity

Delivery of aptamers to mouse cancer models of liver cancer and characterization of organ and tumour metabolic heterogeneity

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Highest producing yeast strains

Selection (using RNA-based sensor) and biochemical characterization of highest producing yeast strain

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Other 2020-02-20

Optimized RNA-based sensor

Optimized RNA-based sensors

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Test of application of titratable RNA-based sensor

Test of application of titratable RNA-based sensor for sequential optimization of thiamine cell factory

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Other 2020-02-20

Elucidation of population wide production heterogeneity on the single cell level

Elucidation of population wide production heterogeneity on the single cell level for thiamine or coumarate cell factory on different fermentation scales

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Quantitative MS and IMS

Combined MS and IMS methods to screen RNA libraries and characterize the ligand binding affinities and the induced conformational changes

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Adenoviral vectors

Adenoviral vectors that allow delivery of aptamers to mouse liver

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

First flux-sensor validated

A first flux-sensor validated

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

In vivo screening system

Development of screening system for the optimization of metabolite-sensing aptamers

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Demonstrators, pilots, prototypes 2020-02-20

RNA-based metabolite sensor

RNA-based sensor for fructose-1,6-bisphosphate

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

First aptamers identified

Aptamers identified for required metabolites

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

RNA-based sensor for thiamine or coumarate

RNA-based sensor for thiamine or coumarate sensing intracellular concentrations in the range 50-5000 ug/L

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Novel SELEX method

Novel SELEX method for identification of RNA molecules that bind to riboswitches

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Scientific courses

Organization and attendance of scientific courses SC1-SC4
(M8,12,18,24) Lead participant:All

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Other 2020-02-20

First flux-signaling metabolites identified

List with potential flux-signaling metabolites in yeast central metabolites

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Documents, reports 2020-02-20

Project website

Project website online
(M3)

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Websites, patent fillings, videos etc. 2020-02-20

Transferable skills courses

Organization and attendance of courses on transferable skills TS1-TS3
(M18,24 and 30) Lead participant: All

Programme: H2020-EU.1.3.1. - Topic(s): MSCA-ITN-2014-ETN

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Other 2020-02-20