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B3Africa

Bridging Biobanking and Biomedical Research across Europe and Africa

Total Cost €

EC-Contrib. €

Partnership

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Outcomes and
results

B3Africa project word cloud

Explore the words cloud of the B3Africa project. It provides you a very rough idea of what is the project "B3Africa" about.

mass planet efficient defragmentation biobank population infrastructures designing biobanks bibbox pipelines personalized human predictive capacity preventive efficiency ontologies heredity standards dramatically cooperation software african bridging training eric africa integrating platform practices leverage b3africa validating informatics sharing infrastructure regulatory harmonizes ethical resource bcnet healthcare lmic h3africa health worldwide bioinformatics data invaluable integration critical actors biobanking upscaling cohort greatest representation maximise representing designed genomic models incredible bbmri supports biomolecular source modules workflows collaborate framework biomedical continents education ebiokit diversity network building

Project "B3Africa" data sheet

The following table provides information about the project.

Coordinator	SVERIGES LANTBRUKSUNIVERSITET Organization address address: ALMAS ALLE 8 city: UPPSALA postcode: 750 07 website: http://www.slu.se contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.
Coordinator Country	Sweden [SE]
Project website	http://www.b3africa.org
Total cost	2˙035˙250 €
EC max contribution	2˙001˙250 € (98%)
Programme	1. H2020-EU.1.4.3.2. (Facilitate strategic international cooperation)
Code Call	H2020-INFRASUPP-2014-2
Funding Scheme	CSA
Starting year	2015
Duration (year-month-day)	from 2015-07-01 to 2018-09-30

Partnership

Take a look of project's partnership.

#	participants	country	role	EC contrib. [€]
1	SVERIGES LANTBRUKSUNIVERSITET SVERIGES LANTBRUKSUNIVERSITET Organization address address: ALMAS ALLE 8 city: UPPSALA postcode: 750 07 website: http://www.slu.se contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	SE (UPPSALA)	coordinator	441˙250.00
2	CENTRE INTERNATIONAL DE RECHERCHE SUR LE CANCER CENTRE INTERNATIONAL DE RECHERCHE SUR LE CANCER Organization address address: 150 COURS ALBERT THOMAS city: LYON CEDEX 08 postcode: 69372 website: www.iarc.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (LYON CEDEX 08)	participant	365˙000.00
3	MEDIZINISCHE UNIVERSITAT GRAZ MEDIZINISCHE UNIVERSITAT GRAZ Organization address address: AUENBRUGGERPLATZ 2 city: GRAZ postcode: 8036 website: http://www.medunigraz.at contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	AT (GRAZ)	participant	235˙000.00
4	KAROLINSKA INSTITUTET KAROLINSKA INSTITUTET Organization address address: Nobels Vag 5 city: STOCKHOLM postcode: 17177 website: www.ki.se contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	SE (STOCKHOLM)	participant	210˙000.00
5	UNIVERSITY OF THE WESTERN CAPE UNIVERSITY OF THE WESTERN CAPE Organization address address: ROBERT SOBUKWE ROAD city: CAPE TOWN postcode: 7535 website: www.uwc.ac.za contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ZA (CAPE TOWN)	participant	210˙000.00
6	UPPSALA UNIVERSITET UPPSALA UNIVERSITET Organization address address: VON KRAEMERS ALLE 4 city: UPPSALA postcode: 751 05 website: www.uu.se contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	SE (UPPSALA)	participant	150˙000.00
7	International Livestock Research Institute International Livestock Research Institute Organization address address: Old Naivasha Rd city: Nairobi postcode: 100 website: www.ilri.org contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	KE (Nairobi)	participant	110˙000.00
8	BIOBANKS AND BIOMOLECULAR RESOURCESRESEARCH INFRASTRUCTURE CONSORTIUM(BBMRI-ERIC) BIOBANKS AND BIOMOLECULAR RESOURCESRESEARCH INFRASTRUCTURE CONSORTIUM(BBMRI-ERIC) Organization address address: NEUE STIFTINGTALSTRASSE 2/B/6 city: GRAZ postcode: 8010 website: www.bbmri-eric.eu contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	AT (GRAZ)	participant	70˙000.00
9	INSTITUTE OF HUMAN VIROLOGY NIGERIA LTDGTE INSTITUTE OF HUMAN VIROLOGY NIGERIA LTDGTE Organization address address: PENT HOUSE MAINA COURT PLOT 252 HERBERT MACAULAY W CENTRAL BUSINESS DISTRICT city: ABUJA postcode: 900248 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	NG (ABUJA)	participant	70˙000.00
10	MAKERERE UNIVERSITY MAKERERE UNIVERSITY Organization address address: Main Campus city: KAMPALA postcode: 256 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	UG (KAMPALA)	participant	70˙000.00
11	STELLENBOSCH UNIVERSITY STELLENBOSCH UNIVERSITY Organization address address: VICTORIA STREET ADMINISTRATION B BUILDING city: STELLENBOSCH postcode: 7600 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ZA (STELLENBOSCH)	participant	70˙000.00

Map

Project objective

B3Africa - Bridging Biobanking and Biomedical Research across Europe and Africa will dramatically improve and facilitate the development of better predictive, preventive and personalized healthcare worldwide. The rapidly evolving African biobanks are an invaluable resource: The African population has the greatest genomic diversity on the planet and represents an incredible resource of information to advance biomedical research. B3Africa aims to implement a cooperation platform and technical informatics framework for biobank integration between Africa and Europe. The collaboration harmonizes the ethical and legal framework, biobank data representation and bioinformatics pipelines for sharing data and knowledge among biobanks and allowing access for researchers from both continents. Main actors from the relevant initiatives including Human Heredity and Health in Africa project (H3Africa), European Biobanking and Biomolecular Resources research infrastructure (BBMRI-ERIC) and LMIC Biobank and Cohort Network (BCNet) collaborate in B3Africa to address the following objectives: • Defining an ethical and regulatory framework for biobank data sharing between Europe and Africa • Defining data models for representing biobank and research data based on existing best practices, standards and ontologies • Designing an informatics platform using existing open-source software (with eBioKit and BiBBox as essential modules) integrating workflows for biobank applications • Implementation of an education and training system for information and capacity building • Validating the B3Africa concept with existing biobanks from both continents B3Africa will provide the critical mass to maximise efficiency in biomedical research, supports defragmentation through integration and allows efficient leverage of existing biobanks and e-infrastructures in Europe and Africa. The technical informatics framework will be designed for easy upscaling and integration with other research infrastructures.

Deliverables

List of deliverables.
Report of available bioinformatics tools	Documents, reports	2019-07-24 16:56:03
LIMS in a Box and design of integration workflows using the BiBBox	Demonstrators, pilots, prototypes	2019-07-24 16:56:05
Performance metrics for the BiBBox platform	Documents, reports	2019-07-24 16:56:04
Complete ethical and legal framework for B3Africa platform	Documents, reports	2019-07-24 16:56:04
Implementation plan	Documents, reports	2019-07-24 16:56:04
Shipping module	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Revenue: Invoicing	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Kit assembly and Distribution module	Demonstrators, pilots, prototypes	2019-07-24 16:56:05
Data model for personal data protection and data sharing and integration	Documents, reports	2019-07-24 16:56:04
Evaluation and sustainability plan	Documents, reports	2019-07-24 16:56:04
Freezer management	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Key target audiences of WP7 trained (face-to-face and online)	Other	2019-07-24 16:56:04
Detailed training plan produced, by key target audiences	Documents, reports	2019-07-24 16:56:03
Report on stakeholder engagement	Documents, reports	2019-07-24 16:56:04
Dissemination plan	Documents, reports	2019-07-24 16:56:04
Access policy	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Face to face course 2	Other	2019-07-24 16:56:03
Harmonized exchange standards and ontologies and design of integration workflows	Documents, reports	2019-07-24 16:56:04
Management Plan	Documents, reports	2019-07-24 16:56:05
A working BiBBox platform at research centers	Demonstrators, pilots, prototypes	2019-07-24 16:56:04
Learning and training material produced	Documents, reports	2019-07-24 16:56:03
Test of LIMS in collaboration with WP2	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Draft report of legal and ethical framework	Documents, reports	2019-07-24 16:56:03
Sample storage and inventory	Demonstrators, pilots, prototypes	2019-07-24 16:56:03
Definition of requirements for big data storage and analysis	Documents, reports	2019-07-24 16:56:05
A working BiBBox platform in a medical school in South Africa	Demonstrators, pilots, prototypes	2019-07-24 16:56:04
Face to face course 1 held to train key players of WP7	Other	2019-07-24 16:56:03
Report on B3Africa jamborees	Documents, reports	2019-07-24 16:56:05
Report of hardware and software requirement for the proof of concept	Documents, reports	2019-07-24 16:56:04
Definition of an informatics data model	Documents, reports	2019-07-24 16:56:05

Take a look to the deliverables list in detail: detailed list of B3Africa deliverables.

Publications

List of publications.
year	authors and title	journal	last update
2017	Tomas Klingstrom, Erik Bongcam-Rudloff, Jane Reichel Legal & ethical compliance when sharing biospecimen published pages: , ISSN: 2041-2649, DOI: 10.1093/bfgp/elx008	Briefings in Functional Genomics	2019-07-24
2016	Jane Riechel Alternative Rule-Making within European Bioethics â€“ Necessary and Therefore Legitimate? published pages: 169-192, ISSN: 2211-0046, DOI: 10.1163/22112596-02102005	Tilburg Law Review 21/2	2019-07-24
2018	Santa Slokenberga, Jane Reichel, Rachel Niringiye, Talishiea Croxton, Carmen Swanepoel, June Okal EU data transfer rules and African legal realities: is data exchange for biobank research realistic? published pages: , ISSN: 2044-3994, DOI: 10.1093/idpl/ipy010	International Data Privacy Law	2019-07-24
2017	Slokenberga Santa, Merino Martinez, Roxana, Reichel Jane. Legal and ethical governance of intercontinental biobanking: Some experiences from a H2020 project published pages: 169-192, ISSN: 0015-8585, DOI:	FÃ¶rvaltningsrÃ¤ttslig Tidskrift 1	2019-07-24
2017	Heimo MÃ¼ller, Nicolas Malservet, Philip Quinlan, Robert Reihs, Matthieu Penicaud, Antoine Chami, Kurt Zatloukal, George Dagher From the evaluation of existing solutions to an all-inclusive package for biobanks published pages: 89-95, ISSN: 2190-7188, DOI: 10.1007/s12553-016-0175-x	Health and Technology 7/1	2019-07-24
2017	Jane Reichel Oversight of EU medical data transfers â€“ an administrative law perspective on cross-border biomedical research administration published pages: 389-400, ISSN: 2190-7188, DOI: 10.1007/s12553-017-0182-6	Health and Technology 7/4	2019-07-24
2017	Tomas KlingstrÃ¶m, Rafael HernÃ¡ndez-de-Diego, ThÃ©o Collard, Erik Bongcam-Rudloff Galaksio, a user friendly workflow-centric front end for Galaxy published pages: 897, ISSN: 2226-6089, DOI: 10.14806/ej.23.0.897	EMBnet.journal 23/0	2019-07-24

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