Opendata, web and dolomites

CRYPTRANS

Characterization of newly discovered but poorly understood fungal-driven trophic processes in freshwater lake ecosystems by metatranscriptomic

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 CRYPTRANS project word cloud

Explore the words cloud of the CRYPTRANS project. It provides you a very rough idea of what is the project "CRYPTRANS" about.

push    pools    remote    molecular    settings    normally    services    ecological    questions    team    disciplines    position    jointly    drive    abound    group    pursuit    biological    dna    shown    habitats    diversity    datasets    readily    phyla    communities    boundaries    locations    generation    sites    metatranscriptomics    convert    fungal    metagenomics    taxonomy    freshwater    thought    accessible    large    progressive    world    implications    anthropogenic    systematics    tech    intent    pressure    overarching    deepest    combination    cryptomycota    substantial    capture    largely    recent    sampling    rna    functional    ecosystems    forefront    he    understand    host    science    poorly    organisms    nutrients    predominantly    vibrant    expertise    sequencing    ecology    sequence    chytridiomycota    gradients    roles    device    fungi    organic    redefine    stable    parts    levels    ultimate    unexplored    functions    there    brings    identification    trophic   

Project "CRYPTRANS" data sheet

The following table provides information about the project.

Coordinator
GOETEBORGS UNIVERSITET 

Organization address
address: VASAPARKEN
city: GOETEBORG
postcode: 405 30
website: www.gu.se

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Sweden [SE]
 Project website http://tinyurl.com/n4bc9sj
 Total cost 185˙857 €
 EC max contribution 185˙857 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2014
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2015
 Duration (year-month-day) from 2015-07-01   to  2017-06-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    GOETEBORGS UNIVERSITET SE (GOETEBORG) coordinator 185˙857.00

Map

 Project objective

Recent research has shown that freshwater systems, and particularly their deepest parts, abound with fungi. These fungi (predominantly in the poorly understood phyla Chytridiomycota and Cryptomycota) are largely new to science and are thought to be involved in ecological processes that convert organic matter into nutrients readily accessible to organisms at higher trophic levels. Given the ever-increasing anthropogenic pressure on freshwater systems, we need to understand these processes and the organisms involved in substantial detail. The present project will characterize these new fungi and detail the processes and ecological services they drive through next-generation sequencing of DNA (metagenomics) and RNA (metatranscriptomics) pools in freshwater depth gradients. The overarching questions are: (1) What fungi are down there? (2) What are their functions and roles? and (3) What are the implications for the study of fungi, freshwater ecosystems, and ecology at large? This combination of taxonomy/systematics and ecological/functional research questions applied to these most unexplored and remote ecological settings represents a novel approach on freshwater systems and biological diversity - one with the potential to redefine the pursuit of biological research questions across biological disciplines and beyond habitats normally targeted. The applicant has developed a new high-tech sampling device capable of stable RNA/DNA capture down to 100 m depth, and he brings substantial expertise on functional and ecological assessment of metagenomics sequence datasets to the project. The host research group is the world authority on molecular identification of fungi and comparison of fungal communities across sites and locations. Jointly this team is in a position to push the boundaries of biological knowledge, with the ultimate intent to allow the applicant to establish a progressive, vibrant research group at the very forefront of freshwater systems research in Europe.

 Publications

year authors and title journal last update
List of publications.
2017 R. Henrik Nilsson, Marisol Sánchez-García, Martin K. Ryberg, Kessy Abarenkov, Christian Wurzbacher, Erik Kristiansson
Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory
published pages: 13-24, ISSN: 1314-4049, DOI: 10.3897/mycokeys.26.14591
MycoKeys 26 2019-07-24

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "CRYPTRANS" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "CRYPTRANS" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.3.2.)

CoCoNat (2019)

Coordination in constrained and natural distributed systems

Read More  

TeamUp (2020)

Understanding and improving team decision making in uncertain environments

Read More  

RipGEESE (2020)

Identifying the ripples of gene regulation evolution in the evolution of gene sequences to determine when animal nervous systems evolved

Read More