Opendata, web and dolomites

Gap2bridge

Bridging the gap: an evolutionary genomics approach to illuminate the prokaryote-to-eukaryote transition.

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 Gap2bridge project word cloud

Explore the words cloud of the Gap2bridge project. It provides you a very rough idea of what is the project "Gap2bridge" about.

transition    back    sequence    organelles    enigmas    unicellular    age    molecular    discovered    origins    insights    unclear    lineage    deep    eukaryotes    phylogenomic    mapping    evolutionary    emergence    eukaryotic    ancestor    uncultivated    combined    innovative    fascinating    genomic    types    biology    signature    multicellular    prokaryote    subcellular    first    content    archaea    emphasis    modern    lokiarchaeota    deeper    origin    domains    colossal    placement    immense    cell    purpose    nature    data    subsequent    esps    infer    lineages    prokaryotes    contribution    phylogenomics    bacteria    latter    ancestors    disciplines    sciences    last    computational    microorganisms    life    genomics    evolution    proteins    itself    elucidating    gene    eukarya    integrate    forms    genome    entirely    cellular    unprecedented    tree    eukaryote    newly    gain    illuminate    diversity    altogether    branching    metagenomics    gap    displaying    trace    archaeal   

Project "Gap2bridge" data sheet

The following table provides information about the project.

Coordinator
UPPSALA UNIVERSITET 

Organization address
address: VON KRAEMERS ALLE 4
city: UPPSALA
postcode: 751 05
website: www.uu.se

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Sweden [SE]
 Project website http://www.ettemalab.com
 Total cost 173˙857 €
 EC max contribution 173˙857 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2015
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2017
 Duration (year-month-day) from 2017-01-01   to  2018-12-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UPPSALA UNIVERSITET SE (UPPSALA) coordinator 173˙857.00

Map

 Project objective

Eukarya – one of the three Domains of Life along with Archaea and Bacteria (i.e. prokaryotes) – include all complex multicellular life forms, as well as a colossal diversity of unicellular microorganisms. At the cellular level, the gap between prokaryotes and eukaryotes is immense, with the latter cell types displaying a large number of complex subcellular organelles and molecular systems. The evolutionary origin of these unique features, and thus of the eukaryotic cell itself, remains one of the most fascinating enigmas in modern biology. Although many eukaryotic-signature proteins (ESPs) are known to trace back to the last eukaryotic common ancestor, their deeper evolutionary origins remain unclear. The major goal of the current proposal is to illuminate the prokaryote to eukaryote transition by elucidating the origin and subsequent evolution of ESPs, as well as their order of emergence. We will focus on the ESPs of archaeal origin with an emphasis on the specific contribution of the newly discovered Lokiarchaeota lineages to the origin of the eukaryotic cell. In addition, we will aim to determine the placement the eukaryote lineage within the tree of Life and infer the age of the “first eukaryote”. Finally, we will use a novel phylogenomic approach to infer the gene content of the archaeal ancestors of eukaryotes by mapping the evolution of ESPs along the tree of Life. For this purpose, we will analyse entirely novel genomic data from several uncultivated Lokiarchaeota lineages, as well as novel sequence data from deep-branching key eukaryotes. This project will integrate approaches from distinct disciplines within life sciences and computational sciences (including molecular evolution, genomics/metagenomics and cell biology), with a strong emphasis on phylogenomics. Altogether, the innovative nature of this work combined with state-of-the-art methods and novel key genome data will allow to gain unprecedented insights in the origin and early evolution of Eukarya.

 Publications

year authors and title journal last update
List of publications.
2018 Anja Spang, Laura Eme, Jimmy H. Saw, Eva F. Caceres, Katarzyna Zaremba-Niedzwiedzka, Jonathan Lombard, Lionel Guy, Thijs J. G. Ettema
Asgard archaea are the closest prokaryotic relatives of eukaryotes
published pages: e1007080, ISSN: 1553-7390, DOI: 10.1371/journal.pgen.1007080
PLOS Genetics 14/3 2019-07-25
2017 Laura Eme, Anja Spang, Jonathan Lombard, Courtney W. Stairs, Thijs J. G. Ettema
Archaea and the origin of eukaryotes
published pages: 711-723, ISSN: 1740-1526, DOI: 10.1038/nrmicro.2017.133
Nature Reviews Microbiology 15/12 2019-07-25

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "GAP2BRIDGE" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "GAP2BRIDGE" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.3.2.)

ROMANCE (2020)

StRategies fOr iMproving Agronomic practices based oN miCrobiomEs.

Read More  

5G-ACE (2019)

Beyond 5G: 3D Network Modelling for THz-based Ultra-Fast Small Cells

Read More  

MacMeninges (2019)

Control of Central Nervous Sytem inflammation by meningeal macrophages, and its impairment upon aging

Read More