Explore the words cloud of the FunKeyGut project. It provides you a very rough idea of what is the project "FunKeyGut" about.
The following table provides information about the project.
|Coordinator Country||Austria [AT]|
|Total cost||1˙498˙279 €|
|EC max contribution||1˙498˙279 € (100%)|
1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
|Duration (year-month-day)||from 2017-04-01 to 2022-03-31|
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We live in an intimate symbiosis with our gut microbiota, which provides us services such as vitamin production, breakdown of dietary compounds, and immune training. Sequencing-based approaches that have been applied to catalogue the gut microbiota have revealed intriguing discoveries associating the microbiome with diet and disease. The next outstanding challenge is to unravel the many activities and interactions that define gut microbiota function.
The gut microbiota is a diverse community of cooperating and competing microbes. These interactions form a network that links organisms with each other and their environment. Interactions in such a “functional network” are based partially, though not exclusively, on food webs. Certain “keystone species”, such as Rumonicoccus bromii, are thought to play a major role in these networks. Though some evidence exists for the presence of keystone species, their identity and activity remains largely unknown. As keystone species are vital to networks they are ideal targets for manipulating the gut microbiota to improve metabolic health and protect against enteropathogen infection.
Given the complexity of the gut microbiota, networks can only be elucidated directly in the native community. This project aims to identify functional networks and keystone species in the human gut using novel approaches that are uniquely and ideally suited for studying microbial activity in complex communities. Using state-of-the-art methods such as stable isotope labeling, Raman microspectroscopy, and secondary ion mass spectrometry (NanoSIMS) we will illuminate functional networks in situ. This will allow us to identify what factors shape gut microbiota activity, reveal important food webs, and ultimately use network knowledge to target the microbiota with prebiotic/probiotic treatments rationally designed to promote health.
|year||authors and title||journal||last update|
Alessandra Riva, Orest Kuzyk, Erica Forsberg, Gary Siuzdak, Carina Pfann, Craig Herbold, Holger Daims, Alexander Loy, Benedikt Warth, David Berry
A fiber-deprived diet disturbs the fine-scale spatial architecture of the murine colon microbiome
published pages: , ISSN: 2041-1723, DOI: 10.1038/s41467-019-12413-0
|Nature Communications 10/1||2019-12-16|
Simone Herp, Sandrine Brugiroux, Debora Garzetti, Diana Ring, Lara M. Jochum, Markus Beutler, Claudia Eberl, Saib Hussain, Steffi Walter, Roman G. Gerlach, Hans J. Ruscheweyh, Daniel Huson, Mikael E. Sellin, Emma Slack, Buck Hanson, Alexander Loy, John F. Baines, Philipp Rausch, Marijana Basic, AndrÃ© Bleich, David Berry, BÃ¤rbel Stecher
Mucispirillum schaedleri Antagonizes Salmonella Virulence to Protect Mice against Colitis
published pages: 681-694.e8, ISSN: 1931-3128, DOI: 10.1016/j.chom.2019.03.004
|Cell Host & Microbe 25/5||2019-12-16|
Gomes, Oudot, MaciÃ , Foito, Carregosa, Stewart, Van de Wiele, Berry, Motilva, Brenner, dos Santos
Berry-Enriched Diet in Salt-Sensitive Hypertensive Rats: Metabolic Fate of (Poly)Phenols and the Role of Gut Microbiota
published pages: 2634, ISSN: 2072-6643, DOI: 10.3390/nu11112634
Kang Soo Lee, MÃ¡rton Palatinszky, FÃ¡tima C. Pereira, Jen Nguyen, Vicente I. Fernandez, Anna J. Mueller, Filippo Menolascina, Holger Daims, David Berry, Michael Wagner, Roman Stocker
An automated Raman-based platform for the sorting of live cells by functional properties
published pages: 1035-1048, ISSN: 2058-5276, DOI: 10.1038/s41564-019-0394-9
|Nature Microbiology 4/6||2019-12-16|
Jesse P. Harrison, David Berry
Vibrational Spectroscopy for Imaging Single Microbial Cells in Complex Biological Samples
published pages: , ISSN: 1664-302X, DOI: 10.3389/fmicb.2017.00675
|Frontiers in Microbiology 8||2019-10-08|
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