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PROTINUS

PROviding new insighT into INteractions between soil fUnctions and Structure

Total Cost €

0

EC-Contrib. €

0

Partnership

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Project "PROTINUS" data sheet

The following table provides information about the project.

Coordinator
INSTITUT DE RECHERCHE POUR LE DEVELOPPEMENT 

Organization address
address: BOULEVARD DE DUNKERQUE 44 CS 90009
city: MARSEILLE
postcode: 13572
website: www.ird.fr

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Project website http://www.protinus.ird.fr
 Total cost 459˙000 €
 EC max contribution 175˙500 € (38%)
 Programme 1. H2020-EU.1.3.3. (Stimulating innovation by means of cross-fertilisation of knowledge)
 Code Call H2020-MSCA-RISE-2014
 Funding Scheme MSCA-RISE
 Starting year 2015
 Duration (year-month-day) from 2015-01-01   to  2018-12-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT DE RECHERCHE POUR LE DEVELOPPEMENT FR (MARSEILLE) coordinator 36˙000.00
2    UNIVERSITE DE LORRAINE FR (NANCY CEDEX) participant 45˙000.00
3    UNIVERSITA DEGLI STUDI DI PADOVA IT (PADOVA) participant 27˙000.00
4    AARHUS UNIVERSITET DK (AARHUS C) participant 22˙500.00
5    UNIVERSITE GRENOBLE ALPES FR (SAINT MARTIN D'HERES) participant 22˙500.00
6    AALBORG UNIVERSITET DK (AALBORG) participant 9˙000.00
7    CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS FR (PARIS) participant 9˙000.00
8    NOVITOM SAS FR (GRENOBLE) participant 4˙500.00
9    NATIONAL UNIVERSITY CORPORATION KUMAMOTO UNIVERSITY JP (CHUO KU KUMAMOTO) partner 0.00
10    SAITAMA UNIVERSITY JP (SAKURA KU SAITAMA) partner 0.00
11    THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED NZ (AUCKLAND) partner 0.00
12    THE UNIVERSITY OF AUCKLAND NZ (AUCKLAND) partner 0.00
13    UNIVERSIDAD NACIONAL AUTONOMA DE MEXICO MX (MEXICO DISTRITO FEDERAL) partner 0.00

Map

 Project objective

The PROTINUS proposal assembles a multi-disciplinary team to combine advanced, applied and theoretical research to create a new standard in imaging, analysing, modelling and predicting the interactions between soil structure and soil functions. Soil structure impacts a whole range of services soil renders to ecosystems, including for example contaminant filtering, carbon storage, root growth, and microbiological diversity.

By using modern imaging, image analysis and modelling techniques, we will develop an integrated approach to perform experiments in soil physics, bio-chemistry, to reconstruct soil structure in 3D and to model soil processes. The evaluated models will be used for predicting the different services soil renders to ecosystems in a dynamic way and for testing classical theory, where soil structure is not directly taken into account. To do so we will bring together the theoretical and practical expertise of the involved researchers, infrastructure of the partnering institutes, soil samples and databases.

The first stage will investigate today’s best practise in experimental soil science and imaging, data analysis and modelling. Our findings will enable our second stage approach where synergies between the different disciplines will be explored. The third stage will provide the cornerstone of a new unified methodology meant to modify practise and outcomes of current experimental/imaging, analysis and modelling approaches. Our final stage will look at the changes brought to each of the specific research area’s practises and how it impacts the understanding of soil structure and its functions.

It is expected that our proposal will foster bilateral collaborations within Europe and with our overseas partners through local and international funding, shared database and infrastructure management, and lead to the creation of a sustainable international network of researchers, infrastructure and institutes.

 Deliverables

List of deliverables.
Summer School in Grenoble Other 2019-06-05 14:14:11
winter School Padova Other 2019-06-05 14:14:11
WP5 and Final report Documents, reports 2019-06-05 14:14:11
WP4 Report Documents, reports 2019-06-05 14:14:11
Progress report - 2 Documents, reports 2019-06-05 14:14:11
MSc courses in Auckland/Grenoble/ Mexico Other 2019-06-05 14:14:11
Workshop in Japan Other 2019-06-05 14:14:11
Work package work plan WP5 Documents, reports 2019-06-05 14:14:11
Work plan for WP3 Documents, reports 2019-06-05 14:14:10
Implement an online dissemination infrastructure Websites, patent fillings, videos etc. 2019-06-05 14:14:10
Work package work plan for WP2 Documents, reports 2019-06-05 14:14:11
Workshop Auckland Other 2019-06-05 14:14:10
Summer school Grenoble Other 2019-06-05 14:14:10
Work package work plan WP4 Documents, reports 2019-06-05 14:14:10
Progress report -1 Documents, reports 2019-06-05 14:14:11
WP2 Report Documents, reports 2019-06-05 14:14:10
WP3 Report Documents, reports 2019-06-05 14:14:10
Workshop in New Zealand Documents, reports 2019-06-05 14:14:10
Workshop Grenoble Other 2019-06-05 14:14:11

Take a look to the deliverables list in detail:  detailed list of PROTINUS deliverables.

 Publications

year authors and title journal last update
List of publications.
2019 Karin Müller, Céline Duwig, Anne-Julie Tinet, Alfonso Gastelum Strozzi, Lorenzo Spadini, Marie Christine Morel, Pascal Charrier
Orchard management and preferential flow in Andosols – comparing two kiwifruit orchards in New Zealand
published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18293
Soil Research 2019-10-08
2019 Müller K., N. Dal Ferro, S. Katuwal, C. Tregurtha, F. Zanini, S. Carmignato, L.Wollesen de Jonge, P. Moldrup: F. Morari
Effect of long-term irrigation and cultivation practices on X-ray CT and gas transport derived pore-network characteristics
published pages: , ISSN: , DOI:
NZ Soil Science Society Conference - Diverse soils, productive landscapes, Napier. 3-6 December 2018 2019-10-08
2019 Hermansen C, Moldrup P, Müller K, Knadel M, Greve MH, Wollesen de Jonge L
Predicting Glyphosate Sorption across New Zealand Pastoral Soils Using Basic Soil Properties and Vis–NIR Spectroscopy
published pages: , ISSN: , DOI:
International Soils Meeting, January 6-9, 2019, San Diego, CA 2019-10-08
2019 M. Benioug, F. Golfier, P. Fischer, C. Oltean, M.A. Buès, X. Yang
Interaction between biofilm growth and NAPL remediation: A pore-scale study
published pages: 82-97, ISSN: 0309-1708, DOI: 10.1016/j.advwatres.2019.01.011
Advances in Water Resources 125 2019-10-08
2018 Robert M Simpson, Karen Mason, Kyle Robertson, Karin Müller
Relationship between Soil Enzyme Activities and Properties with Soil Water Repellency
published pages: , ISSN: , DOI:
NZ Soil Science Society Conference - Diverse soils, productive landscapes, Napier. 3-6 December 2018 2019-10-08
2019 Cecilie Hermansen, Per Moldrup, Karin Müller, Peter Weber Jensen, Carlo van den Dijssel, Paramsothy Jeyakumar, Lis W. de Jonge
Organic carbon content controls the severity of water repellency and the critical moisture level across New Zealand pasture soils
published pages: 281-290, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2018.12.007
Geoderma 338 2019-10-08
2018 Karin M�ller, Nicola Dal Ferro, Sheela Katuwal, Craig Tregurtha, Filippo Zanini, Simone Carmignato, Lis Wollesen de Jonge, Per Moldrup, Francesco Morari
Effect of long-term irrigation and tillage practices on X-ray CT and gas transport derived pore-network characteristics
published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18210
Soil Research 2019-10-08
2019 Erika Shiota, Toshifumi Mukunoki, Laurent Oxarango, Anne-Julie Tinet, Fabrice Golfier
Micro- and macro-scale water retention properties of granular soils: contribution of the X-Ray CT-based voxel percolation method
published pages: , ISSN: 1838-675X, DOI: 10.1071/sr18179
Soil Research 2019-10-08
2017 I. Picoli, N. Dal Ferro, A. Squartini, P. Delmas, A. Berti, F. Morari
X-ray computed microtomography on contrast-enhanced soil samples as aproxy for soil organic matter and microorganisms interactions study
published pages: , ISSN: , DOI:
42° Confresso Nazionale, Il Suolo al servizio degli ecosistemi 2019-10-08
2018 Karin Müller, Karen Mason, Alfonso Gastelum Strozzi, Robert Simpson, Toshiko Komatsu, Ken Kawamoto, Brent Clothier
Runoff and nutrient loss from a water-repellent soil
published pages: 28-37, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2018.02.019
Geoderma 322 2019-06-05
2018 Alfonso Gastelum Strozzi, Céline Duwig, Patrice Delmas, Laurent Oxarango, Blanca Prado, Jorge Marquez
3D imaged soil pore morphology and SPH simulated water flow
published pages: EGU2018-12390, ISSN: , DOI:
European Geosciences Union General Assembly 2018 Vol. 20 2019-06-05
2018 Karin Müller, Nicola Dal Ferro, Craig Tregurtha, Filippo Zanini, Simone Carmignato, Francesco Morari
Carbon content and pore network of a silt loam soil under differentagricultural management practices
published pages: EGU2018-12509, ISSN: , DOI:
European Geosciences Union General Assembly 2018 Vol 20 2019-06-05
2019 Hermansen C, Moldrup P, Müller K, Knadel M, Greve MH, Wollesen de Jonge L
The Relation between Soil Water Repellency and Water Content can be Predicted by Vis–NIR Spectroscopy
published pages: , ISSN: , DOI:
International Soils Meeting, January 6-9, 2019, San Diego, CA 2019-06-05
2018 T. Bahar, F. Golfier, C. Oltéan, E. Lefevre, C. Lorgeoux
Comparison of theory and experiment for NAPL dissolution in porous media
published pages: 49-64, ISSN: 0169-7722, DOI: 10.1016/j.jconhyd.2018.03.004
Journal of Contaminant Hydrology 211 2019-06-05
2018 Karin Müller, Sheela Katuwal, Iain Young, Malcolm McLeod, Per Moldrup, Lis Wollesen de Jonge, Brent Clothier
Characterising and linking X-ray CT derived macroporosity parameters to infiltration in soils with contrasting structures
published pages: Pages 82–91, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2017.10.020
Geoderma Volume 313 2019-06-05
2016 E. Shiota, L. Oxarango, L. Chang, P. Delmas, T. Mukunoki
Analysis of unsaturated properties of a sandy soil using X-Ray CT
published pages: , ISSN: , DOI:
. JEMP (Journées d’Etude des Milieux Poreux), Biarritz, France, 12-14 October 2016 2019-06-05
2016 J. Wu, A-J. Tinet, L. Scholtès, M.A. Buès
Comparative study of five boundary treatment schemes for stationary complex boundaries in the lattice Boltzmann method
published pages: , ISSN: , DOI:
JEMP (Journées d’Etude des Milieux Poreux), Biarritz, France, 12-14 October 2016 2019-06-05
2015 N. Dal Ferro, F. Morari
From Real Soils to 3D-Printed Soils: Reproduction of Complex Pore Network at the Real Size in a Silty-Loam Soil
published pages: 1008, ISSN: 0361-5995, DOI: 10.2136/sssaj2015.03.0097
Soil Science Society of America Journal 79/4 2019-06-05
2015 N. Dal Ferro, A.G. Strozzi, C. Duwig, P. Delmas, P. Charrier, F. Morari
Application of smoothed particle hydrodynamics (SPH) and pore morphologic model to predict saturated water conductivity from X-ray CT imaging in a silty loam Cambisol
published pages: 27-34, ISSN: 0016-7061, DOI: 10.1016/j.geoderma.2015.04.019
Geoderma 255-256 2019-06-05
2015 Z. Peng, C. Duwig, P. Delmas, J. P. Gaudet, A. Gastelum Strozzi, P. Charrier, H. Denis
Visualization and Characterization of Heterogeneous Water Flow in Double-Porosity Media by Means of X-ray Computed Tomography
published pages: 543-564, ISSN: 0169-3913, DOI: 10.1007/s11242-015-0572-z
Transport in Porous Media 110/3 2019-06-05
2017 Piccoli I., Dal Ferro N., Delmas P., Squartini A., Berti A., Morari F.
Study of spatiotemporal soil organic matter dynamics using X-ray μCT and contrast agent
published pages: , ISSN: , DOI:
6th International Symposium on Soil Organic Matter 2019-06-05

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