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AS-ABA SIGNED

Alternative splicing and SR proteins in ABA-mediated plant stress responses

Total Cost €

0

EC-Contrib. €

0

Partnership

0

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 AS-ABA project word cloud

Explore the words cloud of the AS-ABA project. It provides you a very rough idea of what is the project "AS-ABA" about.

sequencing    rip    of    stress    combination    flexible    gene    technologies    hormonal    molecular    localization    abiotic    mechanisms    eukaryotes    gain    plays    relevance    seq    genome    cope    hormone    splicing    genes    protein    implicated    significance    tagged    strategies    diversity    suggests    six    plant    underlying    physiological    arabidopsis    pave    mechanism    version    drought    arginine    mediated    transcripts    mounting    proteome    phytohormone    subcellular    world    causes    immunoprecipitation    action    posttranscriptional    crop    altered    revealing    regulated    expressing    unknown    mechanistic    unfavorable    productivity    tolerance    rna    mode    generation    salinity    levels    proteins    expanding    transcriptome    aba    roles    worldwide    alternative    binding    discovering    brief    abscisic    acid    expression    environmental    sr    central    play    reverse    genetics    efficient    plants    functional    regulating    largely    pervasive    biochemical    serine    regulation    regions   

Project "AS-ABA" data sheet

The following table provides information about the project.

Coordinator
FUNDACAO CALOUSTE GULBENKIAN 

Organization address
address: AVENIDA BERNA 45
city: LISBOA
postcode: 1000
website: www.igc.gulbenkian.pt

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Portugal [PT]
 Project website http://www.igc.gulbenkian.pt/pduque
 Total cost 148˙635 €
 EC max contribution 148˙635 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2015
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2017
 Duration (year-month-day) from 2017-09-01   to  2019-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    FUNDACAO CALOUSTE GULBENKIAN PT (LISBOA) coordinator 148˙635.00

Map

 Project objective

Abscisic acid (ABA), the major plant stress hormone, plays a crucial role in the response to the most pervasive causes of loss of crop productivity worldwide, including drought and high salinity. Serine/arginine-rich (SR) proteins are RNA-binding proteins that play crucial roles in the regulation of alternative splicing (AS), a key posttranscriptional mechanism for expanding proteome diversity and a flexible means of regulating gene expression in higher eukaryotes. While its functional relevance in plants remains largely unknown, mounting evidence suggests a central role for AS in the response to abiotic stress, in particular by targeting the ABA hormonal pathway. Using gene expression analyses, subcellular localization studies and reverse genetics approaches, this project will investigate the functional significance of six ABA-regulated Arabidopsis SR genes in stress responses mediated by the ABA phytohormone. To gain mechanistic insight into the mode of action of the SR proteins implicated in the ABA pathway, the physiological transcripts targeted by these splicing factors to achieve plant stress tolerance will be identified using a combination of genome-wide and biochemical approaches. In brief, next-generation sequencing technologies will be applied to whole transcriptome analysis (RNA-seq) of plants with altered levels of an SR protein and to RNA immunoprecipitation (RIP-seq) in plants expressing a tagged version of the SR protein. In discovering new plant genes that determine the ability to cope with unfavorable environmental conditions and by revealing the molecular mechanisms underlying their mode of action, this work will pave the way for the development of new efficient strategies to improve crop productivity in specific world regions.

 Publications

year authors and title journal last update
List of publications.
2018 Tom Laloum, Guiomar Martín, Paula Duque
Alternative Splicing Control of Abiotic Stress Responses
published pages: 140-150, ISSN: 1360-1385, DOI: 10.1016/j.tplants.2017.09.019
Trends in Plant Science 23/2 2019-10-31

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