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T6S SIGNED

Multi-scale model of bacterial cell-cell interactions

Total Cost €

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EC-Contrib. €

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Partnership

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 T6S project word cloud

Explore the words cloud of the T6S project. It provides you a very rough idea of what is the project "T6S" about.

dimensions    molecular    membrane    context    complexes    cytoplasmic    structure    prove    sub    macromolecular    cryo    envelope    multiple    apparatus    vivo    cell    loaded    native    region    tube    paramount    reveal    beam    penetration    tail    model    microscopy    imaging    engaged    milling    contact    resolve    data    cellular    transporting    property    mediated    manner    utilizes    tomography    thin    interactions    atomic    eukaryotic    central    effectors    anchored    anchoring    bacterial    structures    clustering    ect    injects    questions    complemented    fired    actively    answers    fashion    spike    dependent    bacteria    elucidate    mediate    cells    propels    scales    types    sheath    light    contractile    conformational    structural    fluorescence    prepare    confined    proteins    outside    resolution    technique    translocation    inner    electron    vi    effector    secretion    intercellular    relevance    fundamental    dynamics    micrometer    clarify    t6s    play    integrating    samples    phage    vitro    significance    ion    machines    nanometer    mechanisms   

Project "T6S" data sheet

The following table provides information about the project.

Coordinator
EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH 

Organization address
address: Raemistrasse 101
city: ZUERICH
postcode: 8092
website: https://www.ethz.ch/de.html

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Switzerland [CH]
 Project website https://pilhoferlab.ethz.ch/
 Total cost 1˙751˙853 €
 EC max contribution 1˙751˙853 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2015-STG
 Funding Scheme ERC-STG
 Starting year 2017
 Duration (year-month-day) from 2017-01-01   to  2021-12-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH CH (ZUERICH) coordinator 1˙751˙853.00

Map

 Project objective

Transporting selected proteins across the cell envelope in a controlled manner is a fundamental property of all cell types. For bacteria, secretion systems play a central role in the translocation of effectors that mediate interactions with other cells. The bacterial Type VI Secretion (T6S) system is one of the most widespread secretion systems and, in a cell-cell contact-dependent fashion, it injects effectors into eukaryotic and bacterial targets. The T6S system utilizes a cytoplasmic phage tail-like apparatus that is anchored to the cell envelope. A contractile sheath propels a macromolecular effector-loaded tube/spike-complex outside the cell and into the target.

Here, we will establish a model of T6S-mediated cell-cell interactions by integrating information from the molecular, cellular and intercellular scales. The model will reveal answers to three paramount questions of the field: Aim 1 (molecular scale) will elucidate an atomic model of the T6S membrane-anchoring complex in loaded and fired conformational states. Aim 2 (cellular scale) will identify the mechanisms and relevance of clustering multiple T6S machines in a confined region of the cell. Aim 3 (intercellular scale) will resolve T6S actively engaged in cell-cell interactions to clarify the in vivo structure and significance of the inner tube in effector translocation and target cell penetration.

Electron cryo-tomography (ECT) will be used as the key technique to resolve unique structures in their cellular context, in a native state, in three dimensions and at the crucial nanometer-to-micrometer range. Cryo-focused ion beam milling will be established to prepare samples thin enough for ECT imaging. ECT data will be complemented by high-resolution structural information of sub-complexes (in vitro) and low-resolution fluorescence light microscopy data on dynamics (in vivo). In the future, our approach will prove useful to study other types of bacterial cell-cell interactions.

 Publications

year authors and title journal last update
List of publications.
2018 Shujun Cai, Désirée Böck, Martin Pilhofer, Lu Gan
The in situ structures of mono-, di-, and trinucleosomes in human heterochromatin
published pages: 2450-2457, ISSN: 1059-1524, DOI: 10.1091/mbc.e18-05-0331
Molecular Biology of the Cell 29/20 2019-09-04
2017 Masanori Toyofuku, Gerardo Cárcamo-Oyarce, Tatsuya Yamamoto, Fabian Eisenstein, Chien-Chi Hsiao, Masaharu Kurosawa, Karl Gademann, Martin Pilhofer, Nobuhiko Nomura, Leo Eberl
Prophage-triggered membrane vesicle formation through peptidoglycan damage in Bacillus subtilis
published pages: , ISSN: 2041-1723, DOI: 10.1038/s41467-017-00492-w
Nature Communications 8/1 2019-09-04
2019 Chiara Rapisarda, Yassine Cherrak, Romain Kooger, Victoria Schmidt, Riccardo Pellarin, Laureen Logger, Eric Cascales, Martin Pilhofer, Eric Durand, Rémi Fronzes
In situ and high‐resolution cryo‐EM structure of a bacterial type VI secretion system membrane complex
published pages: e100886, ISSN: 0261-4189, DOI: 10.15252/embj.2018100886
The EMBO Journal 38/10 2019-09-04
2019 Piotr Szwedziak, Martin Pilhofer
Bidirectional contraction of a type six secretion system
published pages: , ISSN: 2041-1723, DOI: 10.1038/s41467-019-09603-1
Nature Communications 10/1 2019-09-04
2018 João M. Medeiros, Désirée Böck, Gregor L. Weiss, Romain Kooger, Roger A. Wepf, Martin Pilhofer
Robust workflow and instrumentation for cryo-focused ion beam milling of samples for electron cryotomography
published pages: 1-11, ISSN: 0304-3991, DOI: 10.1016/j.ultramic.2018.04.002
Ultramicroscopy 190 2019-06-19
2017 Désirée Böck, João M. Medeiros, Han-Fei Tsao, Thomas Penz, Gregor L. Weiss, Karin Aistleitner, Matthias Horn, Martin Pilhofer
In situ architecture, function, and evolution of a contractile injection system
published pages: 713-717, ISSN: 0036-8075, DOI: 10.1126/science.aan7904
Science 357/6352 2019-06-19

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