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CompBioMed SIGNED

A Centre of Excellence in Computational Biomedicine

Total Cost €

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EC-Contrib. €

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Partnership

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Project "CompBioMed" data sheet

The following table provides information about the project.

Coordinator
UNIVERSITY COLLEGE LONDON 

Organization address
address: GOWER STREET
city: LONDON
postcode: WC1E 6BT
website: n.a.

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country United Kingdom [UK]
 Project website http://www.compbiomed.eu
 Total cost 4˙938˙216 €
 EC max contribution 4˙938˙215 € (100%)
 Programme 1. H2020-EU.1.4.1.3. (Development, deployment and operation of ICT-based e-infrastructures)
 Code Call H2020-EINFRA-2015-1
 Funding Scheme RIA
 Starting year 2016
 Duration (year-month-day) from 2016-10-01   to  2019-09-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNIVERSITY COLLEGE LONDON UK (LONDON) coordinator 908˙892.00
2    UNIVERSITEIT VAN AMSTERDAM NL (AMSTERDAM) participant 508˙798.00
3    SURFSARA BV NL (AMSTERDAM) participant 495˙950.00
4    THE UNIVERSITY OF SHEFFIELD UK (SHEFFIELD) participant 456˙368.00
5    UNIVERSITE DE GENEVE CH (GENEVE) participant 388˙225.00
6    BARCELONA SUPERCOMPUTING CENTER - CENTRO NACIONAL DE SUPERCOMPUTACION ES (BARCELONA) participant 372˙076.00
7    THE UNIVERSITY OF EDINBURGH UK (EDINBURGH) participant 335˙831.00
8    CBK SCI CON LIMITED UK (London) participant 277˙143.00
9    THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD UK (OXFORD) participant 264˙955.00
10    LIFETEC GROUP BV NL (EINDHOVEN) participant 247˙987.00
11    UNIVERSIDAD POMPEU FABRA ES (BARCELONA) participant 191˙750.00
12    BULL SAS FR (LES CLAYES SOUS BOIS) participant 138˙043.00
13    EVOTEC (UK) LIMITED UK (ABINGDON OXFORDSHIRE) participant 131˙287.00
14    JANSSEN PHARMACEUTICA NV BE (BEERSE) participant 125˙025.00
15    ACELLERA LABS SL ES (BARCELONA) participant 95˙881.00
16    EVOTEC AG* DE (HAMBURG) participant 0.00

Map

 Project objective

This Centre of Excellence will advance the role of computationally based modelling and simulation within biomedicine. Three related user communities lie at the heart of the CoE: academic, industrial and clinical researchers who all wish to build, develop and extend such capabilities in line with the increasing power of high performance computers. Three distinct exemplar research areas will be pursued: cardiovascular, molecularly-based and neuro-musculoskeletal medicine. Predictive computational biomedicine involves applications that are comprised of multiple components, arranged as far as possible into automated workflows in which data is taken, from an individual patient, processed, and combined into a model which produces predicted health outcomes. Many of the models are multiscale, requiring the coupling of two or more high performance codes. Computational biomedicine holds out the prospect of predicting the effect of personalised medical treatments and interventions ahead of carrying them out, with all the ensuing benefits. Indeed, in some cases, it is already doing so today. The CoE presents a powerful consortium of partners and has an outward facing nature and will actively train, disseminate and engage with these user communities across Europe and beyond. Because this field is new and growing rapidly, it offers numerous innovative opportunities. There are three SMEs and three enterprises within the project, as well as eight associate partners drawn from across the biomedical sector, who are fully aware of the vast potential of HPC in this domain. We shall work with them to advance the exploitation of HPC and will engage closely with medical professionals through our partner hospitals in order to establish modeling and simulation as an integral part of clinical decision making. Our CoE is thus user-driven, integrated, multidisciplinary, and distributed; presenting a vision that is in line with the Work Programme.

 Deliverables

List of deliverables.
Training Plan Documents, reports 2020-02-25 08:21:39
Report on computing and data needs of the biomedical community Documents, reports 2020-02-25 08:21:38
Website Release Websites, patent fillings, videos etc. 2020-02-25 08:21:39
Release of Community Software Repository Websites, patent fillings, videos etc. 2020-02-25 08:21:37
Report on existing solutions in support of biomedical applications Documents, reports 2020-02-25 08:21:39
Quality Assurance Plan Documents, reports 2020-02-25 08:21:38
Report on access mechanisms to HPC systems Documents, reports 2020-02-25 08:21:38
Project Handbook Documents, reports 2020-02-25 08:21:37
Report on Workflow system provision Documents, reports 2020-02-25 08:21:39
Deployment of project informatics platform Websites, patent fillings, videos etc. 2020-02-25 08:21:39
First report on training and dissemination Documents, reports 2020-02-25 08:21:39
Report on dissemination and training material Documents, reports 2020-02-25 08:21:39
Interim Report on Industrial and cPPP Collaboration Documents, reports 2020-02-25 08:21:39
Report on Application Software Readiness and Fast Track Exploitation Documents, reports 2020-02-25 08:21:39
Innovation Plan Documents, reports 2020-02-25 08:21:39
Dissemination Action Plan Documents, reports 2020-02-25 08:21:39
Data Management Plan Open Research Data Pilot 2020-02-25 08:21:39

Take a look to the deliverables list in detail:  detailed list of CompBioMed deliverables.

 Publications

year authors and title journal last update
List of publications.
2019 B. J. M. van Rooij, G. Závodszky, V. W. Azizi Tarksalooyeh, A. G. Hoekstra
Identifying the start of a platelet aggregate by the shear rate and the cell-depleted layer
published pages: 20190148, ISSN: 1742-5689, DOI: 10.1098/rsif.2019.0148
Journal of The Royal Society Interface 16/159 2020-02-25

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The information about "COMPBIOMED" are provided by the European Opendata Portal: CORDIS opendata.

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