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MYCOBIOME SIGNED

Detection of biocontrol agents from casing material to inhibit mushroom mycoparasites through casing microbiome characterization and Raman spectroscopy of isotopically labelled organisms.

Total Cost €

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EC-Contrib. €

0

Partnership

0

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 MYCOBIOME project word cloud

Explore the words cloud of the MYCOBIOME project. It provides you a very rough idea of what is the project "MYCOBIOME" about.

accordingly    rioja    fungal    fungi    departments    compost    pose    host    curie    prospects    facilities    supports    throughput    plant    marie    germination    valuated    bacteria    crop    po    act    bubble    cultivated    formed    suppressive    community    biocontrol    university    trials    complete    analysing    group    microbial    characterization    agents    uk    antagonistic    builds    mushroom    organization    agaricus    tested    disease    detect    microspectroscopy    transferable    arising    centre    cover    beneficial    diseases    stable    pathogens    extensive    material    society    casing    augment    losses    skills    bisporus    spain    certain    diverse    cycle    layer    pilot    labeling    trial    hyphae    oxford    ecosystem    isolate    fellowship    amending    protocol    spores    career    training    mycoparasites    synthetic    designed    microorganisms    inhibiting    structure    microbiome    industry    fellow    confocal    isotopic    complement    asochamp    mycoparasitic    academic    materials    techniques    raman   

Project "MYCOBIOME" data sheet

The following table provides information about the project.

Coordinator
THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD 

Organization address
address: WELLINGTON SQUARE UNIVERSITY OFFICES
city: OXFORD
postcode: OX1 2JD
website: www.ox.ac.uk

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country United Kingdom [UK]
 Total cost 183˙454 €
 EC max contribution 183˙454 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2016
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2017
 Duration (year-month-day) from 2017-03-13   to  2019-03-12

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD UK (OXFORD) coordinator 183˙454.00

Map

 Project objective

Mycoparasites cause significant crop losses in the cultivated mushroom Agaricus bisporus, but as fungal pathogens of cultivated fungi pose major challenges for disease control. The casing layer used to cover mushroom compost supports a diverse community of microorganisms with potential to act as host-specific biocontrol agents capable of inhibiting the germination or growth of mycoparasitic fungi, while even promoting mushroom development. In this project we propose to apply novel and state-of-the-art techniques to characterize the casing microbiome along the crop cycle and identify potential biocontrol agents to control bubble diseases by amending casing with a stable synthetic microbial ecosystem. High-throughput community analysis, developed by the host group and used for the characterization of the plant microbiome, will be implemented to analyse the complete community structure of a suppressive casing material. Target materials will be selected through pilot trials conducted within the Partner Organization (PO) facilities. Potential antagonistic bacteria will be valuated to detect and isolate biocontrol agents through isotopic labeling of fungi (a new protocol for labeling spores and hyphae will be developed) and Raman-confocal microspectroscopy. Potential biocontrol agents will be finally tested in a pilot trial. The project builds a consortium formed by two European institutions, including certain departments from the academic host institution (University of Oxford, UK) and one non-academic PO (ASOCHAMP RIOJA, Spain), a research centre with extensive experience analysing casing materials and mycoparasites. It has been designed to augment and complement the research and transferable skills sets of the Marie Curie fellow and will greatly enhance his career prospects accordingly. Through the training and the research results arising, the Fellowship will be beneficial to the fellow, the host institution, the PO, the mushroom industry and the European society.

 Publications

year authors and title journal last update
List of publications.
2018 Jaime Carrasco, Diego C. Zied, Jose E. Pardo, Gail M. Preston, Arturo Pardo-Giménez
Supplementation in mushroom crops and its impact on yield and quality
published pages: , ISSN: 2191-0855, DOI: 10.1186/s13568-018-0678-0
AMB Express 8/1 2019-04-18
2019 Jaime Carrasco, Maria Luisa Tello, Maria de Toro, Andrzej Tkacz, Philip Poole, Margarita Pérez-Clavijo and Gail Preston
Casing microbiome dynamics during button mushroom cultivation: implications for dryand wet bubble diseases
published pages: , ISSN: 1350-0872, DOI:
Microbiology 2019-04-18

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