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MICRORULES SIGNED

Structural and Functional Architectures of Multi-Kingdom Microbial Consortia Colonizing Plant Roots

Total Cost €

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EC-Contrib. €

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Partnership

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 MICRORULES project word cloud

Explore the words cloud of the MICRORULES project. It provides you a very rough idea of what is the project "MICRORULES" about.

independently    arabidopsis    structuring    conceptual    profiling    binary    assembly    functions    utilize    root    forming    roots    natural    underlying    functionally    endophyte    subsequent    microbes    interpretation    holo    group    reductionist    structure    poorly    members    fungal    thaliana    fungi    oomycetes    establishing    innovative    fundamental    underpin    dissect    settings    metatranscriptome    health    collections    bacteria    healthy    despite    play    community    rules    colonization    laboratory    host    microbial    basis    culture    framework    classes    genetically    networks    communities    functional    multitrophic    transition    model    vitro    genome    profiles    synthetic    microbe    interactions    genes    reconstitution    productivity    connectivity    applies    hypothesis    mycorrhizal    reference    reconstitute    tractable    corresponding    tripartite    balance    plants    rhizobacterium    extensive    colonized    integral    molecular    kingdom    beneficial    maintaining    mechanisms    populations    microbiota    plant    diversity    generate    interaction    investigations    microbiome   

Project "MICRORULES" data sheet

The following table provides information about the project.

Coordinator
MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV 

Organization address
address: HOFGARTENSTRASSE 8
city: Munich
postcode: 80539
website: www.mpg.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Germany [DE]
 Total cost 1˙497˙547 €
 EC max contribution 1˙497˙547 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2017-STG
 Funding Scheme ERC-STG
 Starting year 2017
 Duration (year-month-day) from 2017-09-01   to  2022-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV DE (Munich) coordinator 1˙497˙547.00

Map

 Project objective

The roots of healthy plants are colonized by a rich diversity of microbes, forming multi-kingdom microbial consortia that impact plant productivity. Despite the expected high connectivity between root microbiota members, our understanding of microbe-microbe interactions in structuring microbial networks in plant roots as well as their functional impact on plant growth remains poorly understood. Based on recent findings in my group, I propose a conceptual framework aiming at a functional understanding the holo-plant microbiome, where microbial interactions play an integral role in structuring root-associated microbial communities and maintaining microbiota balance and plant health. By profiling three independently-evolved microbial classes (bacteria, fungi, oomycetes) in the roots of natural Arabidopsis thaliana populations across Europe and establishing corresponding reference culture collections for subsequent reconstitution of the plant microbiota in vitro, I will define fundamental mechanisms underlying the structure and functions of the plant microbiota. I will generate and utilize extensive microbial genome resources for the interpretation of metatranscriptome profiles of multi-kingdom synthetic communities during root colonization. This will contribute to a transition from binary plant-microbe to community-level molecular investigations. Finally, using a genetically tractable tripartite interaction model between the non mycorrhizal plant A. thaliana, a beneficial fungal root endophyte and a rhizobacterium, I propose to functionally dissect the molecular basis of beneficial multitrophic plant-microbe interactions by identifying microbial genes that are essential for both microbe-microbe and microbe-host interactions. My hypothesis-driven research applies innovative reductionist approaches to reconstitute the microbiota of plant roots in laboratory settings to identify fundamental assembly rules and mechanisms that underpin complex plant-microbe interactions.

 Publications

year authors and title journal last update
List of publications.
2020 Thorsten Thiergart, Paloma Durán, Thomas Ellis, Nathan Vannier, Ruben Garrido-Oter, Eric Kemen, Fabrice Roux, Carlos Alonso-Blanco, Jon Ågren, Paul Schulze-Lefert, Stéphane Hacquard
Root microbiota assembly and adaptive differentiation among European Arabidopsis populations
published pages: 122-131, ISSN: 2397-334X, DOI: 10.1038/s41559-019-1063-3
Nature Ecology & Evolution 4/1 2020-03-23
2019 Felix Getzke, Thorsten Thiergart, Stéphane Hacquard
Contribution of bacterial-fungal balance to plant and animal health
published pages: 66-72, ISSN: 1369-5274, DOI: 10.1016/j.mib.2019.10.009
Current Opinion in Microbiology 49 2020-03-23
2018 M. Amine Hassani, Paloma Durán, Stéphane Hacquard
Microbial interactions within the plant holobiont
published pages: , ISSN: 2049-2618, DOI: 10.1186/s40168-018-0445-0
Microbiome 6/1 2019-05-27
2018 Paloma Durán, Thorsten Thiergart, Ruben Garrido-Oter, Matthew Agler, Eric Kemen, Paul Schulze-Lefert, Stéphane Hacquard
Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival
published pages: 973-983.e14, ISSN: 0092-8674, DOI: 10.1016/j.cell.2018.10.020
Cell 175/4 2019-05-23
2018 Aurélie Deveau, Gregory Bonito, Jessie Uehling, Mathieu Paoletti, Matthias Becker, Saskia Bindschedler, Stéphane Hacquard, Vincent Hervé, Jessy Labbé, Olga A Lastovetsky, Sophie Mieszkin, Larry J Millet, Balázs Vajna, Pilar Junier, Paola Bonfante, Bastiaan P Krom, Stefan Olsson, Jan Dirk van Elsas, Lukas Y Wick
Bacterial–fungal interactions: ecology, mechanisms and challenges
published pages: 335-352, ISSN: 1574-6976, DOI: 10.1093/femsre/fuy008
FEMS Microbiology Reviews 42/3 2019-06-06

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