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StressNetAdapt SIGNED

Understanding evolutionary abiotic stress-network plasticity as foundation for new biotechnological strategies

Total Cost €

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EC-Contrib. €

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Partnership

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 StressNetAdapt project word cloud

Explore the words cloud of the StressNetAdapt project. It provides you a very rough idea of what is the project "StressNetAdapt" about.

proteins    modified    critical    list    lyrata    map    literature    combination    sensitive    salt    plant    regulators    salsugineum    glycophyte    ranked    conceptual    analysed    functionally    brassica    stress    performance    relatives    events    species    threaten    evolutionary    abiotic    differential    drought    network    changed    statistical    halleri    tolerance    feed    assembled    understand    candidates    mapping    crops    tolerant    physically    respect    candidate    adapt    population    biological    pipeline    ing    deal    altering    graph    alignability    informed    world    close    theoretical    commercially    crop    reference    brassicaceae    rewired    genetically    biology    direct    integration    closely    interactome    interaction    biotechnological    constitutes    whereas    experimentally    mediated    opportunity    capacity    first    environmental    validated    exploited    transferred    criteria    interacting    data    climate    napus    networks    alignment    plants    tested    signalling    society    biomass    stresses    dynamic    biotechnologically    thaliana    arabidopsis   

Project "StressNetAdapt" data sheet

The following table provides information about the project.

Coordinator
HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH 

Organization address
address: INGOLSTADTER LANDSTRASSE 1
city: NEUHERBERG
postcode: 85764
website: www.helmholtz-muenchen.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
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 Coordinator Country Germany [DE]
 Project website https://www.helmholtz-muenchen.de/en/inet
 Total cost 1˙996˙750 €
 EC max contribution 1˙996˙750 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2014-CoG
 Funding Scheme ERC-COG
 Starting year 2015
 Duration (year-month-day) from 2015-09-01   to  2020-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH DE (NEUHERBERG) coordinator 1˙437˙046.00
2    TECHNISCHE UNIVERSITAET MUENCHEN DE (MUENCHEN) participant 559˙703.00

Map

 Project objective

Abiotic stresses, such as drought or salt stress, affect plant growth and threaten the capacity to feed a growing world population. Understanding and altering how plants deal with stress will be critical for society’s adaptation to a changed climate. I propose a novel systems-biology based approach to identify biotechnological targets based on comparison of interaction and signalling networks of evolutionary related species that show differential abiotic stress tolerance. Similar to most crops, Arabidopsis thaliana is an abiotic-stress sensitive glycophyte whereas several close relatives are stress tolerant. This constitutes an opportunity to understand how plant stress-signalling networks are modified by evolutionary processes to adapt to novel environmental conditions. Biological processes are mediated by physically and functionally interacting proteins. Especially stress response networks are rewired when plants adapt to new environmental conditions. I aim to experimentally map the abiotic stress networks of four closely related brassicaceae: A. thaliana, A. lyrata, A. halleri and E. salsugineum. Novel conceptual advances in interactome mapping and a state-of-the art interactome mapping pipeline will be exploited to ensure direct alignability of the resulting reference networks. In addition the dynamic signalling events under drought stress will be analysed. Using a combination of network alignment, graph theoretical and statistical analyses, data integration, and literature-informed criteria a ranked candidate list of stress response regulators will be assembled. These will be genetically and biotechnologically validated. First level candidates will be tested in Arabidopsis thaliana and evaluated with respect to stress tolerance and overall biomass production. The most promising targets will then be transferred to Brassica napus to evaluate the performance in a commercially relevant crop.

 Publications

year authors and title journal last update
List of publications.
2016 Junshi Yazaki, Mary Galli, Alice Y. Kim, Kazumasa Nito, Fernando Aleman, Katherine N. Chang, Anne-Ruxandra Carvunis, Rosa Quan, Hien Nguyen, Liang Song, José M. Alvarez, Shao-shan Carol Huang, Huaming Chen, Niroshan Ramachandran, Stefan Altmann, Rodrigo A. Gutiérrez, David E. Hill, Julian I. Schroeder, Joanne Chory, Joshua LaBaer, Marc Vidal, Pascal Braun, Joseph R. Ecker
Mapping transcription factor interactome networks using HaloTag protein arrays
published pages: E4238-E4247, ISSN: 0027-8424, DOI: 10.1073/pnas.1603229113
Proceedings of the National Academy of Sciences 113/29 2019-06-06

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