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StressNetAdapt SIGNED

Understanding evolutionary abiotic stress-network plasticity as foundation for new biotechnological strategies

Total Cost €

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EC-Contrib. €

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Partnership

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 StressNetAdapt project word cloud

Explore the words cloud of the StressNetAdapt project. It provides you a very rough idea of what is the project "StressNetAdapt" about.

mapping    alignability    sensitive    altering    adapt    interacting    deal    closely    species    glycophyte    stresses    changed    transferred    modified    first    ranked    constitutes    close    theoretical    opportunity    evolutionary    brassica    informed    salsugineum    biotechnological    statistical    combination    proteins    assembled    salt    plants    drought    tolerance    functionally    alignment    crop    napus    exploited    biology    thaliana    events    lyrata    genetically    world    data    conceptual    abiotic    experimentally    physically    list    biomass    performance    integration    biotechnologically    environmental    whereas    interaction    respect    crops    networks    capacity    commercially    mediated    interactome    arabidopsis    graph    brassicaceae    criteria    understand    pipeline    network    candidates    dynamic    halleri    literature    biological    ing    regulators    differential    analysed    validated    tested    rewired    reference    relatives    threaten    tolerant    feed    plant    population    map    stress    signalling    society    climate    direct    critical    candidate   

Project "StressNetAdapt" data sheet

The following table provides information about the project.

Coordinator
HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH 

Organization address
address: INGOLSTADTER LANDSTRASSE 1
city: NEUHERBERG
postcode: 85764
website: www.helmholtz-muenchen.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
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 Coordinator Country Germany [DE]
 Project website https://www.helmholtz-muenchen.de/en/inet
 Total cost 1˙996˙750 €
 EC max contribution 1˙996˙750 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2014-CoG
 Funding Scheme ERC-COG
 Starting year 2015
 Duration (year-month-day) from 2015-09-01   to  2020-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH DE (NEUHERBERG) coordinator 1˙437˙046.00
2    TECHNISCHE UNIVERSITAET MUENCHEN DE (MUENCHEN) participant 559˙703.00

Map

 Project objective

Abiotic stresses, such as drought or salt stress, affect plant growth and threaten the capacity to feed a growing world population. Understanding and altering how plants deal with stress will be critical for society’s adaptation to a changed climate. I propose a novel systems-biology based approach to identify biotechnological targets based on comparison of interaction and signalling networks of evolutionary related species that show differential abiotic stress tolerance. Similar to most crops, Arabidopsis thaliana is an abiotic-stress sensitive glycophyte whereas several close relatives are stress tolerant. This constitutes an opportunity to understand how plant stress-signalling networks are modified by evolutionary processes to adapt to novel environmental conditions. Biological processes are mediated by physically and functionally interacting proteins. Especially stress response networks are rewired when plants adapt to new environmental conditions. I aim to experimentally map the abiotic stress networks of four closely related brassicaceae: A. thaliana, A. lyrata, A. halleri and E. salsugineum. Novel conceptual advances in interactome mapping and a state-of-the art interactome mapping pipeline will be exploited to ensure direct alignability of the resulting reference networks. In addition the dynamic signalling events under drought stress will be analysed. Using a combination of network alignment, graph theoretical and statistical analyses, data integration, and literature-informed criteria a ranked candidate list of stress response regulators will be assembled. These will be genetically and biotechnologically validated. First level candidates will be tested in Arabidopsis thaliana and evaluated with respect to stress tolerance and overall biomass production. The most promising targets will then be transferred to Brassica napus to evaluate the performance in a commercially relevant crop.

 Publications

year authors and title journal last update
List of publications.
2016 Junshi Yazaki, Mary Galli, Alice Y. Kim, Kazumasa Nito, Fernando Aleman, Katherine N. Chang, Anne-Ruxandra Carvunis, Rosa Quan, Hien Nguyen, Liang Song, José M. Alvarez, Shao-shan Carol Huang, Huaming Chen, Niroshan Ramachandran, Stefan Altmann, Rodrigo A. Gutiérrez, David E. Hill, Julian I. Schroeder, Joanne Chory, Joshua LaBaer, Marc Vidal, Pascal Braun, Joseph R. Ecker
Mapping transcription factor interactome networks using HaloTag protein arrays
published pages: E4238-E4247, ISSN: 0027-8424, DOI: 10.1073/pnas.1603229113
Proceedings of the National Academy of Sciences 113/29 2019-06-06

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