Opendata, web and dolomites

ivMX

Development of the new generation of structural biology by coupling in vivo crystallography to intense x-ray sources

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 ivMX project word cloud

Explore the words cloud of the ivMX project. It provides you a very rough idea of what is the project "ivMX" about.

identification    samples    insects    diffraction    collecting    advantage    mostly    structural    occurring    took    purification    naturally    medical    plants    macromolecules    recombinantly    handling    stands    consuming    amphibians    biological    organisms    implications    crystallography    fishes    coherent    macromolecular    events    complicated    coupled    bacteria    intense    generation    insights    tedious    crystals    mammals    proteins    diverse    involve    window    motivated    crystal    costly    gives    preparation    structures    expressed    readily    bottleneck    emergence    sub    deciphering    reducing    pipelines    decipher    reasonable    unreachable    ray    alone    functions    structure    vivo    atomic    interpretable    inside    platform    synchrotron    ivmx    handled    dictating    mx    fungi    lies    protists    obtain    patterns    biology    opened    sources    characterisation    sizes    ligands    phenomena    protein    requirement    restricted    give    quantities    small    cells    easily    time    micron    initiated    hosts    details    intends    uncontrollable    primary    external    prior   

Project "ivMX" data sheet

The following table provides information about the project.

Coordinator
SYNCHROTRON SOLEIL SOCIETE CIVILE 

Organization address
address: L ORME DES MERISIERS
city: SAINT AUBIN
postcode: 91190
website: http://www.synchrotron-soleil.fr/

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Project website https://www.synchrotron-soleil.fr/fr/lignes-de-lumiere/proxima-1
 Total cost 185˙076 €
 EC max contribution 185˙076 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2015
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2016
 Duration (year-month-day) from 2016-09-01   to  2018-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    SYNCHROTRON SOLEIL SOCIETE CIVILE FR (SAINT AUBIN) coordinator 185˙076.00

Map

 Project objective

Mostly motivated by, but not restricted to the comprehensive analysis and understanding of biological phenomena with potential medical implications, structural biology gives access to the atomic details of macromolecules, allowing to decipher their biological functions. Using state-of-the-art developments coupled to third-generation x-ray synchrotron sources, macromolecular x-ray crystallography (MX) stands as the primary method for determining the structures of proteins, alone or in complex with partner ligands. The major bottleneck of MX lies in the requirement to obtain crystals of reasonable sizes that can easily by handled and readily give rise to interpretable diffraction patterns. Prior to x-ray diffraction studies, crystal production pipelines involve the characterisation, purification and handling of samples in large quantities through multi-step, complicated, time-consuming and costly procedures.

The identification of protein crystals naturally occurring inside cells and organisms as diverse as bacteria, protists, fungi, plants, fishes, amphibians, insects and mammals has opened a window for a new type of MX and structural biology. Recently, the emergence of the in vivo crystallography (ivMX) approach took advantage in the developments of new intense coherent x-ray sources that allow collecting diffraction patterns from sub-micron crystals, targets so far unreachable at other x-ray sources. This proposal intends to get further insights into the yet uncontrollable events dictating in vivo crystal growth, by structure determination and analysis of readily available ivMX systems. While deciphering these phenomena and applying them to external proteins recombinantly expressed in hosts where in vivo crystal growth could be identified, a small platform for ivMX will be initiated, with the aim of reducing the tedious and costly sample preparation steps currently used in MX.

 Publications

year authors and title journal last update
List of publications.
2017 Pierre Montaville, Leonard Chavas
De novo in-vivo protein crystal structure: is experimental phasing required?
published pages: C878, ISSN: , DOI:
Acta Cryst A73 2019-05-27
2017 Charline J. J. Gerard, Gilles Ferry, Laurent M. Vuillard, Jean A. Boutin, Leonard M. G. Chavas, Tiphaine Huet, Nathalie Ferte, Romain Grossier, Nadine Candoni, Stéphane Veesler
Crystallization via tubing microfluidics permits both in situ and ex situ X-ray diffraction
published pages: 574-578, ISSN: 2053-230X, DOI: 10.1107/S2053230X17013826
Acta Crystallographica Section F Structural Biology Communications 73/10 2019-05-27
2018 Sanchari Banerjee, Pierre Montaville, Leonard M. G. Chavas, S. Ramaswamy
The New Era of Microcrystallography
published pages: 273-281, ISSN: 0019-4964, DOI: 10.1007/s41745-018-0086-0
Journal of the Indian Institute of Science 98/3 2019-05-27

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "IVMX" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "IVMX" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.3.2.)

CYBERSECURITY (2018)

Cyber Security Behaviours

Read More  

ROSETTA (2020)

Deciphering the Role of aberrant glycOSylation in the rEsponse to Targeted TherApies for breast cancer

Read More  

LiverMacRegenCircuit (2020)

Elucidating the role of macrophages in liver regeneration and tissue unit formation

Read More