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GSAS SIGNED

Genomic Strategies Against STB disease of wheat

Total Cost €

0

EC-Contrib. €

0

Partnership

0

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 GSAS project word cloud

Explore the words cloud of the GSAS project. It provides you a very rough idea of what is the project "GSAS" about.

unless    dependent    ireland    1bn    made    envisage    genetic    thereafter    nature    strategy    chemical    networks    causing    appearance    accumulated    assisted    contrasting    genomic    estimates    employed    cereal    offset    fungicide    resistance    left    diversemagic    strains    maps    demonstrated    durable    environmental    50    population    profiles    combine    marker    house    cycle    legislation    primary    causal    dependency    removed    disciplinary    responsive    select    editing    haplotype    agent    gene    assist    gt    parallel    edit    sequences    effort    zymoseptoria    plus    genome    advantage    borne    genotype    septoria    data    fungicides    action    phenotyped    pa    inoculum    sources    niab    stb    simultaneously    lines    threatens    gebvs    absence    600    phenotype    wheat    capture    disease    exome    calculate    gs    loci    firstly    35k    secondment    qtl    unsustainable    previously    tritici    loses    resistant    varieties    entire    commercial    crop    breeding    snp    untreated    rnaseq    form    blotch    natural    individuals    wholly   

Project "GSAS" data sheet

The following table provides information about the project.

Coordinator
TEAGASC - AGRICULTURE AND FOOD DEVELOPMENT AUTHORITY 

Organization address
address: Oak Park
city: Carlow
postcode: R93
website: n.a.

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Ireland [IE]
 Total cost 175˙866 €
 EC max contribution 175˙866 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2017
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2018
 Duration (year-month-day) from 2018-07-16   to  2021-01-13

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    TEAGASC - AGRICULTURE AND FOOD DEVELOPMENT AUTHORITY IE (Carlow) coordinator 175˙866.00

Map

 Project objective

A primary crop in Ireland, wheat is the most important cereal within the EU. Zymoseptoria tritici, the causal agent of septoria tritici blotch (STB) disease, continuously threatens Europe’s wheat crop causing loses of up to 50%, if left untreated. The absence of commercial varieties with adequate STB resistance means the sector is wholly dependent on fungicides to offset STB, with control costs >€1bn pa. This chemical dependency has driven the appearance of fungicide resistant strains of Z. tritici. In addition, EU legislation has removed several fungicides due to environmental concerns. In short, the European wheat sector has an unsustainable future unless greater effort is made to identify durable sources of resistance to STB. This is where new breeding methodologies (e.g. genomic selection, GS) can assist traditional breeding initiatives. GS is a form of marker assisted selection that simultaneously estimates all loci, haplotype or marker effects across the entire genome to calculate Genomic Estimated Breeding Values (GEBVs). GEBVs are then used to select individuals of interest for advancement in the breeding cycle. This proposal will apply a GS strategy to a unique population (>600) of wheat lines (DiverseMAGIC, NIAB), that are firstly phenotyped in the presence of natural field-borne STB inoculum. Taking advantage of NIAB resources (35K SNP data, exome capture, genetic maps), this action will combine genotype and field phenotype data so that relevant QTL associated with contrasting STB resistant profiles can be identified. In parallel, an in-house gene editing system will be employed to edit several gene sequences that have demonstrated to be STB responsive based on previously accumulated RNAseq data. Multi-disciplinary in nature, we envisage this proposal (plus secondment) will identify novel sources of resistance to STB disease that thereafter will be integrated into European wheat breeding programmes through existing networks with this project’s partners.

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The information about "GSAS" are provided by the European Opendata Portal: CORDIS opendata.

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