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PredAlgoBC SIGNED

Machine learning prediction for breast cancer therapy

Total Cost €

0

EC-Contrib. €

0

Partnership

0

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 PredAlgoBC project word cloud

Explore the words cloud of the PredAlgoBC project. It provides you a very rough idea of what is the project "PredAlgoBC" about.

biological    tumor    tools    genetic    complexity    subclonal    immune    lack    women    stored    compromised    biomarkers    treat    combining    homogeneous    difficulty    power    datasets    advocate    learning    microenvironment    interface    algorithms    multidisciplinary    methodological    patients    markers    treatment    guiding    center    overview    ico    single    innovative    discovery    alterations    observations    marker    option    mainly    cells    search    strategy    clinicians    efficient    incidence    death    resistance    predictive    highest    reveal    sufficient    bioinfomics    bulk    technologies    data    mining    overcome    association    cell    models    grant    cross    biology    stromal    entity    mathematicians    personalized    populations    platform    geo    bioinformaticians    therapeutic    driver    cancer    arrayexpress    throughput    worldwide    databases    subtypes    structure    dimension    regional    omics    pipeline    analyze    heterogeneity    optimal    breast    limited    medicine    types    treatments    statistical    normalization    mathematics    machine   

Project "PredAlgoBC" data sheet

The following table provides information about the project.

Coordinator
INSTITUT DE CANCEROLOGIE DE L'OUEST 

Organization address
address: 15 RUE ANDRE BOQUEL, CS10059
city: ANGERS
postcode: 49100
website: https://www.centrepaulpapin.org/

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 184˙707 €
 EC max contribution 184˙707 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2018
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2019
 Duration (year-month-day) from 2019-10-01   to  2021-09-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT DE CANCEROLOGIE DE L'OUEST FR (ANGERS) coordinator 184˙707.00

Map

 Project objective

Breast cancer is the cancer with the highest incidence in women worldwide, and is the leading cause of cancer-related death, mainly due to treatment resistance. Recently, tumor heterogeneity has been described as one of the key driver in treatment failure. Indeed, tumor is not a homogeneous entity to treat, but a complex association of subclonal populations driven by their own genetic alterations, and immune and stromal cells from microenvironment. Breast cancer subtypes and tumor heterogeneity advocate for the development of tailored, personalized treatments, but so far, the discovery of efficient predictive markers has been compromised by the lack of adapted biological models and methodological tools. The recent developments of high-throughput methods for bulk and single-cell analyses has generated large ‘omics’ datasets from patients, stored in open access databases (ArrayExpress, GEO). Combining these numerous datasets will grant a sufficient statistical power to reveal a comprehensive overview of tumor complexity. However, this data mining is currently limited by methodological challenges like cross-platform normalization and the difficulty to analyze complex data structure with high dimension observations. To overcome these issues, I propose to implement a multidisciplinary project at the interface between mathematics, biology, and information technologies. With the support of the mathematicians and bioinformaticians from the Bioinfomics unit of the regional comprehensive cancer center (ICO), I will develop and implement machine-learning algorithms in the search of predictive biomarkers for breast cancer treatment. This innovative strategy will lead to personalized medicine in breast cancer by guiding clinicians in the selection of the optimal therapeutic option. Moreover, this generated pipeline for predictive marker discovery could be further adapted for the treatment of other cancer types.

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The information about "PREDALGOBC" are provided by the European Opendata Portal: CORDIS opendata.

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