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PredAlgoBC SIGNED

Machine learning prediction for breast cancer therapy

Total Cost €

0

EC-Contrib. €

0

Partnership

0

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 PredAlgoBC project word cloud

Explore the words cloud of the PredAlgoBC project. It provides you a very rough idea of what is the project "PredAlgoBC" about.

platform    medicine    multidisciplinary    lack    combining    machine    reveal    strategy    resistance    overcome    mining    bioinfomics    efficient    incidence    pipeline    biological    personalized    mathematics    structure    sufficient    marker    subtypes    alterations    tools    guiding    markers    methodological    power    optimal    ico    association    death    arrayexpress    center    overview    learning    search    models    option    limited    interface    entity    driver    analyze    therapeutic    immune    biomarkers    microenvironment    bioinformaticians    omics    compromised    technologies    mainly    patients    single    treatments    observations    tumor    cells    discovery    highest    cross    datasets    regional    innovative    bulk    subclonal    algorithms    women    statistical    advocate    data    grant    biology    cancer    genetic    homogeneous    worldwide    databases    difficulty    treat    clinicians    heterogeneity    treatment    dimension    mathematicians    throughput    geo    types    stromal    complexity    stored    normalization    predictive    cell    breast    populations   

Project "PredAlgoBC" data sheet

The following table provides information about the project.

Coordinator
INSTITUT DE CANCEROLOGIE DE L'OUEST 

Organization address
address: 15 RUE ANDRE BOQUEL, CS10059
city: ANGERS
postcode: 49100
website: https://www.centrepaulpapin.org/

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 184˙707 €
 EC max contribution 184˙707 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2018
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2019
 Duration (year-month-day) from 2019-10-01   to  2021-09-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT DE CANCEROLOGIE DE L'OUEST FR (ANGERS) coordinator 184˙707.00

Map

 Project objective

Breast cancer is the cancer with the highest incidence in women worldwide, and is the leading cause of cancer-related death, mainly due to treatment resistance. Recently, tumor heterogeneity has been described as one of the key driver in treatment failure. Indeed, tumor is not a homogeneous entity to treat, but a complex association of subclonal populations driven by their own genetic alterations, and immune and stromal cells from microenvironment. Breast cancer subtypes and tumor heterogeneity advocate for the development of tailored, personalized treatments, but so far, the discovery of efficient predictive markers has been compromised by the lack of adapted biological models and methodological tools. The recent developments of high-throughput methods for bulk and single-cell analyses has generated large ‘omics’ datasets from patients, stored in open access databases (ArrayExpress, GEO). Combining these numerous datasets will grant a sufficient statistical power to reveal a comprehensive overview of tumor complexity. However, this data mining is currently limited by methodological challenges like cross-platform normalization and the difficulty to analyze complex data structure with high dimension observations. To overcome these issues, I propose to implement a multidisciplinary project at the interface between mathematics, biology, and information technologies. With the support of the mathematicians and bioinformaticians from the Bioinfomics unit of the regional comprehensive cancer center (ICO), I will develop and implement machine-learning algorithms in the search of predictive biomarkers for breast cancer treatment. This innovative strategy will lead to personalized medicine in breast cancer by guiding clinicians in the selection of the optimal therapeutic option. Moreover, this generated pipeline for predictive marker discovery could be further adapted for the treatment of other cancer types.

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The information about "PREDALGOBC" are provided by the European Opendata Portal: CORDIS opendata.

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