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PredAlgoBC SIGNED

Machine learning prediction for breast cancer therapy

Total Cost €

0

EC-Contrib. €

0

Partnership

0

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 PredAlgoBC project word cloud

Explore the words cloud of the PredAlgoBC project. It provides you a very rough idea of what is the project "PredAlgoBC" about.

sufficient    data    treat    stromal    types    guiding    immune    marker    medicine    power    subtypes    subclonal    grant    markers    center    single    ico    microenvironment    datasets    homogeneous    lack    innovative    geo    resistance    entity    therapeutic    discovery    efficient    complexity    predictive    structure    difficulty    genetic    limited    observations    analyze    multidisciplinary    bioinformaticians    statistical    driver    stored    death    algorithms    tools    treatment    populations    cells    biomarkers    combining    regional    heterogeneity    databases    personalized    advocate    worldwide    interface    incidence    normalization    biological    mining    arrayexpress    clinicians    alterations    methodological    mathematics    overcome    bioinfomics    pipeline    association    reveal    breast    platform    option    biology    omics    cross    patients    mathematicians    overview    women    machine    treatments    technologies    mainly    cell    dimension    search    compromised    optimal    cancer    throughput    highest    tumor    models    strategy    bulk    learning   

Project "PredAlgoBC" data sheet

The following table provides information about the project.

Coordinator
INSTITUT DE CANCEROLOGIE DE L'OUEST 

Organization address
address: 15 RUE ANDRE BOQUEL, CS10059
city: ANGERS
postcode: 49100
website: https://www.centrepaulpapin.org/

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 184˙707 €
 EC max contribution 184˙707 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2018
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2019
 Duration (year-month-day) from 2019-10-01   to  2021-09-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT DE CANCEROLOGIE DE L'OUEST FR (ANGERS) coordinator 184˙707.00

Map

 Project objective

Breast cancer is the cancer with the highest incidence in women worldwide, and is the leading cause of cancer-related death, mainly due to treatment resistance. Recently, tumor heterogeneity has been described as one of the key driver in treatment failure. Indeed, tumor is not a homogeneous entity to treat, but a complex association of subclonal populations driven by their own genetic alterations, and immune and stromal cells from microenvironment. Breast cancer subtypes and tumor heterogeneity advocate for the development of tailored, personalized treatments, but so far, the discovery of efficient predictive markers has been compromised by the lack of adapted biological models and methodological tools. The recent developments of high-throughput methods for bulk and single-cell analyses has generated large ‘omics’ datasets from patients, stored in open access databases (ArrayExpress, GEO). Combining these numerous datasets will grant a sufficient statistical power to reveal a comprehensive overview of tumor complexity. However, this data mining is currently limited by methodological challenges like cross-platform normalization and the difficulty to analyze complex data structure with high dimension observations. To overcome these issues, I propose to implement a multidisciplinary project at the interface between mathematics, biology, and information technologies. With the support of the mathematicians and bioinformaticians from the Bioinfomics unit of the regional comprehensive cancer center (ICO), I will develop and implement machine-learning algorithms in the search of predictive biomarkers for breast cancer treatment. This innovative strategy will lead to personalized medicine in breast cancer by guiding clinicians in the selection of the optimal therapeutic option. Moreover, this generated pipeline for predictive marker discovery could be further adapted for the treatment of other cancer types.

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The information about "PREDALGOBC" are provided by the European Opendata Portal: CORDIS opendata.

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