Opendata, web and dolomites

West-Life

World-wide E-infrastructure for structural biology

Total Cost €

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EC-Contrib. €

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Partnership

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Project "West-Life" data sheet

The following table provides information about the project.

Coordinator
SCIENCE AND TECHNOLOGY FACILITIES COUNCIL 

There are not information about this coordinator. Please contact Fabio for more information, thanks.

 Coordinator Country United Kingdom [UK]
 Project website http://about.west-life.eu
 Total cost 3˙981˙125 €
 EC max contribution 3˙981˙125 € (100%)
 Programme 1. H2020-EU.1.4.1.3. (Development, deployment and operation of ICT-based e-infrastructures)
 Code Call H2020-EINFRA-2015-1
 Funding Scheme RIA
 Starting year 2015
 Duration (year-month-day) from 2015-11-01   to  2018-10-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNITED KINGDOM RESEARCH AND INNOVATION UK (SWINDON) coordinator 780˙750.00
2    SCIENCE AND TECHNOLOGY FACILITIES COUNCIL UK (SWINDON) coordinator 0.00
3    EUROPEAN MOLECULAR BIOLOGY LABORATORY DE (HEIDELBERG) participant 641˙750.00
4    CONSORZIO INTERUNIVERSITARIO RISONANZE MAGNETICHE DI METALLO PROTEINE IT (FIRENZE) participant 421˙250.00
5    AGENCIA ESTATAL CONSEJO SUPERIOR DEINVESTIGACIONES CIENTIFICAS ES (MADRID) participant 402˙500.00
6    Masarykova univerzita CZ (BRNO STRED) participant 393˙250.00
7    UNIVERSITEIT UTRECHT NL (UTRECHT) participant 392˙250.00
8    ISTITUTO NAZIONALE DI FISICA NUCLEARE IT (FRASCATI) participant 344˙000.00
9    LUNA SAS FR (PARIS) participant 258˙000.00
10    STICHTING HET NEDERLANDS KANKER INSTITUUT-ANTONI VAN LEEUWENHOEK ZIEKENHUIS NL (AMSTERDAM) participant 194˙625.00
11    INSTRUCT ACADEMIC SERVICES LIMITED UK (OXFORD) participant 152˙750.00

Map

 Project objective

The focus of structural biology is shifting from single macromolecules produced by simpler prokaryotic organisms, to the macromolecular machinery of higher organisms, including systems of central relevance for human health. Structural biologists are expert in one or more techniques. They now often need to use complementary techniques in which they are less expert. Instruct supports them in using multiple experimental techniques, and visiting multiple experimental facilities, within a single project. The Protein Data Bank is a public repository for the final structure. Journals require deposition as a precondition of publication. However, metadata is often incomplete. This project will pilot an infrastructure for storing and processing data that supports the growing use of combined techniques. There are some technique-specific pipelines for data analysis and structure determination. Little is available in terms of automated pipelines to handle integrated datasets. Integrated management of structural biology data from different techniques is lacking altogether. The proposed activity will integrate the data management facilities that already exist, and enable the provision of new ones. The resulting integration will provide users with an overview of the experiments performed at the different research infrastructures visited, and links to the different data stores. It will extend existing facilities for processing this data. As processing is performed, it will automatically capture metadata reflecting the history of the project. The effort will use existing metadata standards, and integrate with them new domain-specific metadata terms. This proposal will develop application level service specific to uses cases in structural biology, enabling structural biologists to get the benefit of the generic services developed by EUDAT and the EGI.

 Deliverables

List of deliverables.
Report on existing metadata standards, and proposals for new vocabularies Documents, reports 2019-10-29 14:54:03
Final report Documents, reports 2019-10-29 14:54:09
Sustainability report Documents, reports 2019-10-29 14:54:04
Report on Final project conference Documents, reports 2019-10-29 14:54:04
A HADDOCK server for EM Documents, reports 2019-10-11 14:45:43
Update report on activities of the helpdesk Documents, reports 2019-10-11 14:45:43
Final report on deployment of consolidated platform and the overall architecture Documents, reports 2019-10-11 14:45:43
Report on Assembly queries Documents, reports 2019-10-11 14:45:43
EM quality assurance workflow Documents, reports 2019-10-11 14:45:43
Report on the progress of the deployment of consolidated platform and its inteactions with infrastructure Documents, reports 2019-10-11 14:45:43
A REFMAC server for EM and NMR Documents, reports 2019-10-11 14:45:43
Report on industrial user engagement Documents, reports 2019-10-11 14:45:43
Repositories Documents, reports 2019-10-11 14:45:43
Quality analysis workflow for predicted complexes Documents, reports 2019-10-11 14:45:43
Report on available VMs with associated documentation/use case for each of them Documents, reports 2019-10-11 14:45:43
Report on prototypes constructed using Big Data approaches Documents, reports 2019-10-11 14:45:43
Report on access and usage statistics of the various services Documents, reports 2019-10-11 14:45:43
ProteinCCD with construct scoring and ranking Documents, reports 2019-10-11 14:45:43
Report on the activities of the help desk Documents, reports 2019-10-11 14:45:43
Report on the access and usage statistics Documents, reports 2019-10-11 14:45:43
Report on Provenance Open Research Data Pilot 2019-10-11 14:45:43
Update of requirements by other RI Documents, reports 2019-10-11 14:45:43
Interim report on T2.1 Documents, reports 2019-10-11 14:45:42
Multi-core implementation of PDB_REDO server Documents, reports 2019-10-11 14:45:42
VRE-integrated PDBe search and query APIs Documents, reports 2019-10-11 14:45:42
ProteinCCD with new analysis options Documents, reports 2019-10-11 14:45:42
Report on experience with deployment of consolidated platform and its interaction with infrastructure Documents, reports 2019-10-11 14:45:42
Overview of external datasets, strategy of access methods, and implications on the portal architecture Documents, reports 2019-10-11 14:45:42
Common security model design Documents, reports 2019-10-11 14:45:42
Interim report on T2.2 Documents, reports 2019-10-11 14:45:43
Draft sustainability work plan Documents, reports 2019-10-11 14:45:42
Periodic report 1 Documents, reports 2019-10-11 14:45:42
Project web pages Websites, patent fillings, videos etc. 2019-10-11 14:45:42
Report on Virtual folder Documents, reports 2019-10-11 14:45:42
Consolidated architecture of job submission and interaction with infrastructure Documents, reports 2019-10-11 14:45:42
D1.1 Report on Kick off meeting Documents, reports 2019-10-11 14:45:42
Overview (baseline) of services and portals to be integrated into the new VRE Documents, reports 2019-10-11 14:45:42
Project portal Websites, patent fillings, videos etc. 2019-10-11 14:45:42
Publication of a joint document on the usage of structural data in different biomedical RIs Documents, reports 2019-10-11 14:45:42
Report on requirements by other RI Documents, reports 2019-10-11 14:45:42
Organisation of a round table or joint meeting involving ESFRIs Documents, reports 2019-10-11 14:45:42
Summary report of SB community engagement Documents, reports 2019-10-11 14:45:42
Assessment of the life cycle of structural data and comparison with other scientific data Documents, reports 2019-10-11 14:45:42

Take a look to the deliverables list in detail:  detailed list of West-Life deliverables.

 Publications

year authors and title journal last update
List of publications.
2018 Katarina Elez, Alexandre M. J. J. Bonvin, Anna Vangone
Distinguishing crystallographic from biological interfaces in protein complexes: role of intermolecular contacts and energetics for classification
published pages: , ISSN: 1471-2105, DOI: 10.1186/s12859-018-2414-9
BMC Bioinformatics 19/S15 2019-10-29
2018 Alessia Lasorsa, Idir Malki, François-Xavier Cantrelle, Hamida Merzougui, Emmanuelle Boll, Jean-Charles Lambert, Isabelle Landrieu
Structural Basis of Tau Interaction With BIN1 and Regulation by Tau Phosphorylation
published pages: , ISSN: 1662-5099, DOI: 10.3389/fnmol.2018.00421
Frontiers in Molecular Neuroscience 11 2019-10-29
2017 Stefano Giuntini, Linda Cerofolini, Enrico Ravera, Marco Fragai, Claudio Luchinat
Atomic structural details of a protein grafted onto gold nanoparticles
published pages: , ISSN: 2045-2322, DOI: 10.1038/s41598-017-18109-z
Scientific Reports 7/1 2019-10-29
2018 Zeynep Kurkcuoglu, Panagiotis I. Koukos, Nevia Citro, Mikael E. Trellet, J. P. G. L. M. Rodrigues, Irina S. Moreira, Jorge Roel-Touris, Adrien S. J. Melquiond, Cunliang Geng, Jörg Schaarschmidt, Li C. Xue, Anna Vangone, A. M. J. J. Bonvin
Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2
published pages: 175-185, ISSN: 0920-654X, DOI: 10.1007/s10822-017-0049-y
Journal of Computer-Aided Molecular Design 32/1 2019-10-29
2017 A. Vangone, J. P. G. L. M. Rodrigues, L. C. Xue, G. C. P. van Zundert, C. Geng, Z. Kurkcuoglu, M. Nellen, S. Narasimhan, E. Karaca, M. van Dijk, A. S. J. Melquiond, K. M. Visscher, M. Trellet, P. L. Kastritis, A. M. J. J. Bonvin
Sense and simplicity in HADDOCK scoring: Lessons from CASP-CAPRI round 1
published pages: 417-423, ISSN: 0887-3585, DOI: 10.1002/prot.25198
Proteins: Structure, Function, and Bioinformatics 85/3 2019-10-29
2018 Evgeny Krissinel, Ville Uski, Andrey Lebedev, Martyn Winn, Charles Ballard
Distributed computing for macromolecular crystallography
published pages: 143-151, ISSN: 2059-7983, DOI: 10.1107/S2059798317014565
Acta Crystallographica Section D Structural Biology 74/2 2019-10-29
2017 Irina S. Moreira, Panagiotis I. Koukos, Rita Melo, Jose G. Almeida, Antonio J. Preto, Joerg Schaarschmidt, Mikael Trellet, Zeynep H. Gümüş, Joaquim Costa, Alexandre M. J. J. Bonvin
SpotOn: High Accuracy Identification of Protein-Protein Interface Hot-Spots
published pages: , ISSN: 2045-2322, DOI: 10.1038/s41598-017-08321-2
Scientific Reports 7/1 2019-10-29
2018 Bart van Beusekom, Wouter G. Touw, Mahidhar Tatineni, Sandeep Somani, Gunaretnam Rajagopal, Jinquan Luo, Gary L. Gilliland, Anastassis Perrakis, Robbie P. Joosten
Homology-based hydrogen bond information improves crystallographic structures in the PDB
published pages: 798-808, ISSN: 0961-8368, DOI: 10.1002/pro.3353
Protein Science 27/3 2019-10-29
2013 Mikael Trellet, Adrien S. J. Melquiond, Alexandre M. J. J. Bonvin
A Unified Conformational Selection and Induced Fit Approach to Protein-Peptide Docking
published pages: e58769, ISSN: 1932-6203, DOI: 10.1371/journal.pone.0058769
PLoS ONE 8/3 2019-10-29
2016 Linda Cerofolini, Sabrina Amar, Janelle L. Lauer, Tommaso Martelli, Marco Fragai, Claudio Luchinat, Gregg B. Fields
Bilayer Membrane Modulation of Membrane Type 1 Matrix Metalloproteinase (MT1-MMP) Structure and Proteolytic Activity
published pages: , ISSN: 2045-2322, DOI: 10.1038/srep29511
Scientific Reports 6/1 2019-10-29
2013 Robert Dagil, Charlotte O\'Shea, Anders Nykjær, Alexandre M. J. J. Bonvin, Birthe B. Kragelund
Gentamicin Binds to the Megalin Receptor as a Competitive Inhibitor Using the Common Ligand Binding Motif of Complement Type Repeats
published pages: 4424-4435, ISSN: 0021-9258, DOI: 10.1074/jbc.M112.434159
Journal of Biological Chemistry 288/6 2019-10-29
2016 Dimitrios Spiliotopoulos, Panagiotis L. Kastritis, Adrien S. J. Melquiond, Alexandre M. J. J. Bonvin, Giovanna Musco, Walter Rocchia, Andrea Spitaleri
dMM-PBSA: A New HADDOCK Scoring Function for Protein-Peptide Docking
published pages: , ISSN: 2296-889X, DOI: 10.3389/fmolb.2016.00046
Frontiers in Molecular Biosciences 3 2019-10-29
2016 G.C.P. van Zundert, A.M.J.J. Bonvin
Defining the limits and reliability of rigid-body fitting in cryo-EM maps using multi-scale image pyramids
published pages: 252-258, ISSN: 1047-8477, DOI: 10.1016/j.jsb.2016.06.011
Journal of Structural Biology 195/2 2019-10-29
2017 David Dilworth, Santosh K. Upadhyay, Pierre Bonnafous, Amiirah Bibi Edoo, Sarah Bourbigot, Francy Pesek-Jardim, Geoff Gudavicius, Jason J. Serpa, Evgeniy V. Petrotchenko, Christoph H. Borchers, Christopher J. Nelson, Cameron D. Mackereth
The basic tilted helix bundle domain of the prolyl isomerase FKBP25 is a novel double-stranded RNA binding module
published pages: 11989-12004, ISSN: 0305-1048, DOI: 10.1093/nar/gkx852
Nucleic Acids Research 45/20 2019-10-29
2018 Joerg Schaarschmidt, Bohdan Monastyrskyy, Andriy Kryshtafovych, Alexandre M.J.J. Bonvin
Assessment of contact predictions in CASP12: Co-evolution and deep learning coming of age
published pages: 51-66, ISSN: 0887-3585, DOI: 10.1002/prot.25407
Proteins: Structure, Function, and Bioinformatics 86 2019-10-29
2015 Segura, Joan; Sanchez-Garcia, Ruben; Martinez, Marta; Cuenca-Alba, Jesus; Tabas-Madrid, Daniel; Sorzano, C.O.S; Carazo, JM
3DBIONOTES v2.0: a web server for the automatic annotation of macromolecular structures
published pages: , ISSN: 1367-4803, DOI: 10.5281/zenodo.1038019
Bioinformatics 32 2019-10-29
2018 Fruzsina Hobor, Andre Dallmann, Neil J. Ball, Carla Cicchini, Cecilia Battistelli, Roksana W. Ogrodowicz, Evangelos Christodoulou, Stephen R. Martin, Alfredo Castello, Marco Tripodi, Ian A. Taylor, Andres Ramos
A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets
published pages: , ISSN: 2041-1723, DOI: 10.1038/s41467-018-03182-3
Nature Communications 9/1 2019-10-29
2018 Nelly Morellet, Xianghong Li, Silke A Wieninger, Jennifer L Taylor, Julien Bischerour, Séverine Moriau, Ewen Lescop, Benjamin Bardiaux, Nathalie Mathy, Nadine Assrir, Mireille Bétermier, Michael Nilges, Alison B Hickman, Fred Dyda, Nancy L Craig, Eric Guittet
Sequence-specific DNA binding activity of the cross-brace zinc finger motif of the piggyBac transposase
published pages: 2660-2677, ISSN: 0305-1048, DOI: 10.1093/nar/gky044
Nucleic Acids Research 46/5 2019-10-29
2017 Valeria Putignano, Antonio Rosato, Lucia Banci, Claudia Andreini
MetalPDB in 2018: a database of metal sites in biological macromolecular structures
published pages: D459-D464, ISSN: 0305-1048, DOI: 10.1093/nar/gkx989
Nucleic Acids Research 46/D1 2019-10-29
2017 Katherine A. Gentry, Elke Prade, Carlo Barnaba, Meng Zhang, Mukesh Mahajan, Sang-Choul Im, G. M. Anantharamaiah, Satoshi Nagao, Lucy Waskell, Ayyalusamy Ramamoorthy
Kinetic and Structural Characterization of the Effects of Membrane on the Complex of Cytochrome b 5 and Cytochrome c
published pages: , ISSN: 2045-2322, DOI: 10.1038/s41598-017-08130-7
Scientific Reports 7/1 2019-10-29
2018 Alberto Marra, Jiajia Dong, Tiancheng Ma, Stefano Giuntini, Elisa Crescenzo, Linda Cerofolini, Marco Martinucci, Claudio Luchinat, Marco Fragai, Cristina Nativi, Alessandro Dondoni
Protein Glycosylation through Sulfur Fluoride Exchange (SuFEx) Chemistry: The Key Role of a Fluorosulfate Thiolactoside
published pages: , ISSN: 0947-6539, DOI: 10.1002/chem.201803912
Chemistry - A European Journal 2019-10-29
2018 Panagiotis I. Koukos, Li C. Xue, Alexandre M. J. J. Bonvin
Protein–ligand pose and affinity prediction: Lessons from D3R Grand Challenge 3
published pages: , ISSN: 0920-654X, DOI: 10.1007/s10822-018-0148-4
Journal of Computer-Aided Molecular Design 2019-10-29
2017 Ruben Sanchez-Garcia, Carlos Sorzano, Jose Carazo, Joan Segura
3DCONS-DB: A Database of Position-Specific Scoring Matrices in Protein Structures
published pages: 2230, ISSN: 1420-3049, DOI: 10.3390/molecules22122230
Molecules 22/12 2019-10-29
2018 Oleg Kovalevskiy, Robert A. Nicholls, Fei Long, Azzurra Carlon, Garib N. Murshudov
Overview of refinement procedures within REFMAC 5: utilizing data from different sources
published pages: 215-227, ISSN: 2059-7983, DOI: 10.1107/S2059798318000979
Acta Crystallographica Section D Structural Biology 74/3 2019-10-11
2018 Bart van Beusekom, Krista Joosten, Maarten L. Hekkelman, Robbie P. Joosten, Anastassis Perrakis
Homology-based loop modeling yields more complete crystallographic protein structures
published pages: 585-594, ISSN: 2052-2525, DOI: 10.1107/S2052252518010552
IUCrJ 5/5 2019-10-11
2018 Linda Cerofolini, Tommaso Staderini, Stefano Giuntini, Enrico Ravera, Marco Fragai, Giacomo Parigi, Roberta Pierattelli, Claudio Luchinat
Long-range paramagnetic NMR data can provide a closer look on metal coordination in metalloproteins
published pages: 71-80, ISSN: 0949-8257, DOI: 10.1007/s00775-017-1511-y
JBIC Journal of Biological Inorganic Chemistry 23/1 2019-10-11
2016 Helen M Berman, Stephen K Burley, Gerard J Kleywegt, John L Markley, Haruki Nakamura, Sameer Velankar
The archiving and dissemination of biological structure data
published pages: 17-22, ISSN: 0959-440X, DOI: 10.1016/j.sbi.2016.06.018
Current Opinion in Structural Biology 40 2019-10-11
2018 Mahta Mirzaei, Saeed Mirdamadi, Mohamad Reza Ehsani, Mahmoud Aminlari
Production of antioxidant and ACE-inhibitory peptides from Kluyveromyces marxianus protein hydrolysates: Purification and molecular docking
published pages: 696-705, ISSN: 1021-9498, DOI: 10.1016/j.jfda.2017.07.008
Journal of Food and Drug Analysis 26/2 2019-10-11
2018 Azzurra Carlon, Enrico Ravera, Giacomo Parigi, Garib N. Murshudov, Claudio Luchinat
Joint X-ray/NMR structure refinement of multidomain/multisubunit systems
published pages: , ISSN: 0925-2738, DOI: 10.1007/s10858-018-0212-3
Journal of Biomolecular NMR 2019-10-11
2018 Jasmine Y. Young, John D. Westbrook, Zukang Feng, Raul Sala, Ezra Peisach, Thomas J. Oldfield, Sanchayita Sen, Aleksandras Gutmanas, David R. Armstrong, John M. Berrisford, Li Chen, Minyu Chen, Luigi Di Costanzo, Dimitris Dimitropoulos, Guanghua Gao, Sutapa Ghosh, Swanand Gore, Vladimir Guranovic, Pieter M.S. Hendrickx, Brian P. Hudson, Reiko Igarashi, Yasuyo Ikegawa, Naohiro Kobayashi, Catherine L. Lawson, Yuhe Liang, Steve Mading, Lora Mak, M. Saqib Mir, Abhik Mukhopadhyay, Ardan Patwardhan, Irina Persikova, Luana Rinaldi, Eduardo Sanz-Garcia, Monica R. Sekharan, Chenghua Shao, G. Jawahar Swaminathan, Lihua Tan, Eldon L. Ulrich, Glen van Ginkel, Reiko Yamashita, Huanwang Yang, Marina A. Zhuravleva, Martha Quesada, Gerard J. Kleywegt, Helen M. Berman, John L. Markley, Haruki Nakamura, Sameer Velankar, Stephen K. Burley
OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive
published pages: 536-545, ISSN: 0969-2126, DOI: 10.1016/j.str.2017.01.004
Structure 25/3 2019-10-11
2017 Swanand Gore, Eduardo Sanz García, Pieter M.S. Hendrickx, Aleksandras Gutmanas, John D. Westbrook, Huanwang Yang, Zukang Feng, Kumaran Baskaran, John M. Berrisford, Brian P. Hudson, Yasuyo Ikegawa, Naohiro Kobayashi, Catherine L. Lawson, Steve Mading, Lora Mak, Abhik Mukhopadhyay, Thomas J. Oldfield, Ardan Patwardhan, Ezra Peisach, Gaurav Sahni, Monica R. Sekharan, Sanchayita Sen, Chenghua Shao, Oliver S. Smart, Eldon L. Ulrich, Reiko Yamashita, Martha Quesada, Jasmine Y. Young, Haruki Nakamura, John L. Markley, Helen M. Berman, Stephen K. Burley, Sameer Velankar, Gerard J. Kleywegt
Validation of Structures in the Protein Data Bank
published pages: 1916-1927, ISSN: 0969-2126, DOI: 10.1016/j.str.2017.10.009
Structure 25/12 2019-10-11
2017 Jesús Cuenca-Alba, Laura del Cano, Josué Gómez Blanco, José Miguel de la Rosa Trevín, Pablo Conesa Mingo, Roberto Marabini, Carlos Oscar S. Sorzano, Jose María Carazo
ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
published pages: 20-27, ISSN: 1047-8477, DOI: 10.1016/j.jsb.2017.06.004
Journal of Structural Biology 200/1 2019-10-11
2018 Davide Sala, Andrea Giachetti, Antonio Rosato
Molecular dynamics simulations of metalloproteins: A folding study of rubredoxin from Pyrococcus furiosus
published pages: 77-96, ISSN: 2377-9098, DOI: 10.3934/biophy.2018.1.77
AIMS Biophysics 5/1 2019-10-11
2018 Jasmine Y Young, John D Westbrook, Zukang Feng, Ezra Peisach, Irina Persikova, Raul Sala, Sanchayita Sen, John M Berrisford, G Jawahar Swaminathan, Thomas J Oldfield, Aleksandras Gutmanas, Reiko Igarashi, David R Armstrong, Kumaran Baskaran, Li Chen, Minyu Chen, Alice R Clark, Luigi Di Costanzo, Dimitris Dimitropoulos, Guanghua Gao, Sutapa Ghosh, Swanand Gore, Vladimir Guranovic, Pieter M S Hendrickx, Brian P Hudson, Yasuyo Ikegawa, Yumiko Kengaku, Catherine L Lawson, Yuhe Liang, Lora Mak, Abhik Mukhopadhyay, Buvaneswari Narayanan, Kayoko Nishiyama, Ardan Patwardhan, Gaurav Sahni, Eduardo Sanz-García, Junko Sato, Monica R Sekharan, Chenghua Shao, Oliver S Smart, Lihua Tan, Glen van Ginkel, Huanwang Yang, Marina A Zhuravleva, John L Markley, Haruki Nakamura, Genji Kurisu, Gerard J Kleywegt, Sameer Velankar, Helen M Berman, Stephen K Burley
Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data
published pages: , ISSN: 1758-0463, DOI: 10.1093/database/bay002
Database 2018 2019-10-11
2018 Zorica Latinović, Adrijana Leonardi, Lidija Kovačič, Cho Koh, Jernej Šribar, Alenka Bakija, Divi Venkateswarlu, R. Kini, Igor Križaj
The First Intrinsic Tenase Complex Inhibitor with Serine Protease Structure Offers a New Perspective in Anticoagulant Therapy
published pages: 1713-1728, ISSN: 0340-6245, DOI: 10.1055/s-0038-1669785
Thrombosis and Haemostasis 118/10 2019-10-11
2017 Marco VERLATO, Paolo Andreetto, Jan Astalos, Miroslav Dobrucky, Andrea Giachetti, David Rebatto, Antonio Rosato, Viet TRAN, Lisa Zangrando
EGI federated platforms supporting accelerated computing
published pages: 20, ISSN: , DOI: 10.22323/1.293.0020
Proceedings of International Symposium on Grids and Clouds (ISGC) 2017 — PoS(ISGC2017) 2019-10-11
2018 Chris Morris
The Life Cycle of Structural Biology Data
published pages: , ISSN: 1683-1470, DOI: 10.5334/dsj-2018-026
Data Science Journal 17 2019-10-11
2016 Irina de Sousa Moreira
Supervised Classification Applied to Hot-Spot Detection in Protein-Protein Interfaces
published pages: , ISSN: , DOI:
30 2019-10-11
2018 J. Gómez-Blanco, J.M. de la Rosa-Trevín, R. Marabini, L. del Cano, A. Jiménez, M. Martínez, R. Melero, T. Majtner, D. Maluenda, J. Mota, Y. Rancel, E Ramírez-Aportela, J.L. Vilas, M. Carroni, S. Fleischmann, E. Lindahl, A.W. Ashton, M. Basham, D.K. Clare, K. Savage, C.A. Siebert, G.G. Sharov, C.O.S. Sorzano, P. Conesa, J.M. Carazo
Using Scipion for stream image processing at Cryo-EM facilities
published pages: 457-463, ISSN: 1047-8477, DOI: 10.1016/j.jsb.2018.10.001
Journal of Structural Biology 204/3 2019-10-11
2019 Linda Cerofolini, Stefano Giuntini, Azzurra Carlon, Enrico Ravera, Vito Calderone, Marco Fragai, Giacomo Parigi, Claudio Luchinat
Characterization of PEGylated Asparaginase: New Opportunities from NMR Analysis of Large PEGylated Therapeutics
published pages: , ISSN: 0947-6539, DOI: 10.1002/chem.201804488
Chemistry - A European Journal 2019-10-11
2018 Elisabetta Argenzio, Jeffrey Klarenbeek, Katarzyna M. Kedziora, Leila Nahidiazar, Tadamoto Isogai, Anastassis Perrakis, Kees Jalink, Wouter H. Moolenaar, Metello Innocenti
Profilin binding couples chloride intracellular channel protein CLIC4 to RhoA–mDia2 signaling and filopodium formation
published pages: 19161-19176, ISSN: 0021-9258, DOI: 10.1074/jbc.RA118.002779
Journal of Biological Chemistry 293/50 2019-10-11

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