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ADOPT BBMRI-ERIC

implementAtion anD OPeration of the gateway for healTh into BBMRI-ERIC

Total Cost €

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EC-Contrib. €

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Project "ADOPT BBMRI-ERIC" data sheet

The following table provides information about the project.

Coordinator
BIOBANKS AND BIOMOLECULAR RESOURCES RESEARCH INFRASTRUCTURE CONSORTIUM (BBMRI-ERIC) 

Organization address
address: NEUE STIFTINGTALSTRASSE 2/B/6
city: GRAZ
postcode: 8010
website: www.bbmri-eric.eu

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Austria [AT]
 Project website http://www.bbmri-eric.eu/scientific-collaboration/adopt-bbmri-eric/
 Total cost 4˙949˙448 €
 EC max contribution 4˙949˙448 € (100%)
 Programme 1. H2020-EU.1.4.1.1. (Developing new world-class research infrastructures)
 Code Call H2020-INFRADEV-1-2015-1
 Funding Scheme RIA
 Starting year 2015
 Duration (year-month-day) from 2015-10-01   to  2019-03-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    BIOBANKS AND BIOMOLECULAR RESOURCES RESEARCH INFRASTRUCTURE CONSORTIUM (BBMRI-ERIC) AT (GRAZ) coordinator 3˙000˙702.00
2    DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG DE (HEIDELBERG) participant 315˙802.00
3    FRIEDRICH-ALEXANDER-UNIVERSITAET ERLANGEN NUERNBERG DE (ERLANGEN) participant 315˙802.00
4    ACADEMISCH ZIEKENHUIS LEIDEN NL (LEIDEN) participant 159˙344.00
5    INSTITUT NATIONAL DE LA SANTE ET DE LA RECHERCHE MEDICALE FR (PARIS) participant 158˙314.00
6    UPPSALA UNIVERSITET SE (UPPSALA) participant 129˙104.00
7    STICHTING KANKERREGISTER - FONDATION REGISTRE DU CANCER BE (Brussels) participant 108˙312.00
8    CENTRE INTERNATIONAL DE RECHERCHE SUR LE CANCER FR (LYON CEDEX 08) participant 106˙949.00
9    ISTITUTO ORTOPEDICO RIZZOLI IT (BOLOGNA) participant 103˙530.00
10    SWISS BIOBANKING PLATFORM CH (LAUSANNE) participant 94˙062.00
11    NORGES TEKNISK-NATURVITENSKAPELIGE UNIVERSITET NTNU NO (TRONDHEIM) participant 93˙447.00
12    CHARITE - UNIVERSITAETSMEDIZIN BERLIN DE (BERLIN) participant 88˙763.00
13    TARTU ULIKOOL EE (TARTU) participant 65˙325.00
14    IDRYMA IATROVIOLOGIKON EREUNON AKADEMIAS ATHINON EL (ATHINA) participant 54˙500.00
15    UNIVERSITY COLLEGE LONDON UK (LONDON) participant 41˙691.00
16    SIEC BADAWCZA LUKASIEWICZ - PORT POLSKI OSRODEK ROZWOJU TECHNOLOGII PL (WROCLAW) participant 22˙562.00
17    MASARYKUV ONKOLOGICKY USTAV CZ (BRNO) participant 21˙950.00
18    DOKUZ EYLUL UNIVERSITESI TR (ALSANCAK IZMIR) participant 16˙387.00
19    KLINIKUM RECHTS DER ISAR DER TECHNISCHEN UNIVERSITAT MUNCHEN DE (MUENCHEN) participant 15˙375.00
20    KAROLINSKA INSTITUTET SE (STOCKHOLM) participant 15˙100.00
21    Ministry of Health of the Republic of Cyprus CY (Nicosia) participant 12˙000.00
22    LATVIJAS BIOMEDICINAS PETIJUMU UN STUDIJU CENTRS LV (RIGA) participant 10˙421.00
23    SCHWEIZERISCHER NATIONALFONDS ZUR FORDERUNG DER WISSENSCHAFTLICHEN FORSCHUNG CH (Bern) participant 0.00

Map

 Project objective

'BBMRI-ERIC: the Biobanking and BioMolecular resources Research Infrastructure - European Research Infrastructure Consortium, aims to establish, operate and develop a Pan-European distributed research infrastructure in order to facilitate the access to biological resources as well as facilities and to support high quality biomolecular and biomedical research. The ADOPT BBMRI-ERIC proposal aims at boosting and accelerating implementation of BBMRI-ERIC and its services. Its main deliverables are designed to complete or launch the construction of key Common Services of the Research Infrastructure as required for ESFRI-projects 'under implementation', reflecting the targets of the European Research Area (ERA). One of the challenges in the post-genomic era is the research on common complex diseases, such as cancer, diabetes and Alzheimer’s disease. Revealing these diseases will depend critically on the study of human biological samples and data from large numbers of patients and healthy individuals. The EU’s ageing population is will result in an increase in many of those diseases and consequently an increased healthcare expenditure for senior citizens. BBMRI-ERIC is a specific European asset having become a fundamental component in addressing the ongoing and future requirements particularly of Europe's health service frameworks, including competitiveness and innovativeness of health-related industries. Its implementation is essential for the understanding of the diversity of human diseases, biological samples and corresponding data, which are required for the development of any new drug or diagnostic assay and are, therefore, critical for the advancement in health research, ultimately leading to personalised medicine. BBMRI-ERIC will provide a gateway access to the collections of the European research community, expertise and services building on the outcome of ADOPT BBMRI-ERIC. '

 Deliverables

List of deliverables.
Reports on the access procedure Documents, reports 2020-03-23 15:37:07
Governance model for the sustainability of RD biobanks Documents, reports 2020-03-23 15:37:07
Data set on samples from colorectal cancer patients Documents, reports 2020-03-23 15:37:07
Performance indicators for biobanks Documents, reports 2020-03-23 15:37:07
Report on educational and training events and tools Documents, reports 2020-03-23 15:37:07
Implementation of the RD Common Service Other 2020-03-23 15:37:07
Final report of WP8 Documents, reports 2020-03-23 15:37:07
Collaboration agreement with other ESFRI-BMS research infrastructures, IMI and national biomarker programs Other 2020-03-23 15:37:07
Handbook user needs Websites, patent fillings, videos etc. 2020-03-23 15:37:07
Patient-related data for colorectal cancer samples Documents, reports 2020-03-23 15:37:07
List of data, services, technologies/technologic platforms for each Country Documents, reports 2020-03-23 15:37:06
Harmonised quality standards Documents, reports 2020-03-23 15:37:06
Best practice document for optimal usage of omics technologies for biomarkers Documents, reports 2020-03-23 15:37:05
Data matrix for characterisation of diseases Other 2020-03-23 15:37:06
Operational platform for sharing experience Other 2020-03-23 15:37:06
Work towards formal certification according to relevant standards Other 2020-03-23 15:37:06
Release of the project specific website, and adaption of the internal communication platform and mailing lists Websites, patent fillings, videos etc. 2020-03-23 15:37:05
Implementation of performance, outcome and impact indicators Documents, reports 2020-03-23 15:37:05
Booklet describing processes and tools in place for the operation of the Common Service ELSI for its users Documents, reports 2020-03-23 15:37:05
Ethical Governance Framework and ethics check for ADOPT BBMRI-ERIC Other 2020-03-23 15:37:05
Implementation of the BBMRI-ERIC architecture and database Other 2020-03-23 15:37:05
Report of Country mapping in the field of biobanking Documents, reports 2020-03-23 15:37:05
Ontology-based toolset for mapping of the biobanking terminologies Other 2020-03-23 15:37:05
Harmonised access procedure to samples and data Documents, reports 2020-03-23 15:37:05
Procedure and checklist for on-site visit evaluation Documents, reports 2020-03-23 15:37:05
RD Biobank section in BBMRI-ERIC catalogue Other 2020-03-23 15:37:05
Letter of Interest of founding members of a Biomarker Expert Centre Other 2020-03-23 15:37:06
General annual reports Other 2020-03-23 15:37:06
Consolidated registry of BBMRI-ERIC biobanks Other 2020-03-23 15:37:05
Reports of the Advisory Committee meetings Documents, reports 2020-03-23 15:37:05
IT-tool for monitoring compliance of biobanks with CEN TS for molecular diagnostics examinations Other 2020-03-23 15:37:05
List of qualified EU biobanks Documents, reports 2020-03-23 15:37:05
Workshops held within the 4 regions of primary interest Websites, patent fillings, videos etc. 2020-03-23 15:37:05
Reports from meetings of the coordination activity Documents, reports 2020-03-23 15:37:05
Registry/biobank support service/ Help-desk facility Other 2020-03-23 15:37:05
Stakeholder Forum Meeting Report Documents, reports 2020-03-23 15:37:05
Report on return to investment models Documents, reports 2020-03-23 15:37:05
User interface for collection of the colon cancer cases and database Other 2020-03-23 15:37:05
Security and privacy architecture Documents, reports 2020-03-23 15:37:05
Final report Other 2020-03-23 15:37:07
Report of the Pilot Study Documents, reports 2020-03-23 15:37:07
Guideline for biobanks to comply with EU in vitro diagnostics regulation Documents, reports 2020-03-23 15:37:05
Implementation of new ELSI tools, notably procedure to enhance public debate Other 2020-03-23 15:37:05
Report on harmonised cost recovery process Documents, reports 2020-03-23 15:37:05
Setup of all bodies like the international Advisory Committee, etc. Other 2020-03-23 15:37:05
Annual workshops & reports and possible consensus statements on specific topics Other 2020-03-23 15:37:05
Biobank connector specification and reference connector implementation Other 2020-03-23 15:37:05

Take a look to the deliverables list in detail:  detailed list of ADOPT BBMRI-ERIC deliverables.

 Publications

year authors and title journal last update
List of publications.
2019 David van Enckevort
BBMRI-ERIC Directory Manual for data managers
published pages: , ISSN: , DOI: 10.5281/zenodo.3452137
1 2020-03-23
2017 Mate S, Kadioglu D, Majeed RW, Stöhr MR, Folz M, Vormstein P, Storf H, Brucker DP, Keune D, Zerbe N, Hummel M, Senghas K, Prokosch HU, Lablans M.
Proof-of-Concept Integration of Heterogeneous Biobank IT Infrastructures into a Hybrid Biobanking Network.
published pages: , ISSN: , DOI: 10.3233/978-1-61499-808-2-100
Studies in Health Technology and Informatics 2020-03-23
2019 Goisauf, Melanie; Durnová, Anna; Grewal, Jasjote; Mayrhofer, Michaela
How-to Guide: Governance in Biobanking
published pages: , ISSN: , DOI: 10.5281/zenodo.3516948
1 2020-03-23
2017 Marika Doucet, Martin Yuille, Luke Georghiou, Georges Dagher
Biobank sustainability: current status and future prospects
published pages: 1-7, ISSN: 2253-1785, DOI: 10.2147/bsam.s100899
Journal of Biorepository Science for Applied Medicine Volume 5 2020-03-23
2017 Kurt Zatloukal, Cornelia Stumptner, Christoph Schreiner
IT-­‐tool for monitoring compliance of biobanks with CEN/TS for molecular diagnostics examinations
published pages: , ISSN: , DOI: 10.5281/zenodo.2598076
1 2020-03-23
2018 Jalanko, Anu; Simell, Birgit; Silander, Kaisa; Wutte, Andrea; Zatloukal, Kurt; Metspalu, Andres; Hveem, Kristian; Lavitrano, Marialuisa
Handbook for biobanks to meet users\' needs for biomarker discovery, development and validation
published pages: , ISSN: , DOI: 10.5281/zenodo.3506863
1 2020-03-23
2017 Rumyana Proynova, Diogo Alexandre, Martin Lablans, David Van Enckevort, Sebastian Mate, Niina Eklund, Kaisa Silander, Michael Hummel, Petr Holub, Frank Ückert
A Decentralized IT Architecture for Locating and Negotiating Access to Biobank Samples
published pages: , ISSN: , DOI: 10.3233/978-1-61499-808-2-75
Studies in Health Technology and Informatics 2020-03-23
2017 Mario Mitt, Mart Kals, Kalle Pärn, Stacey B Gabriel, Eric S Lander, Aarno Palotie, Samuli Ripatti, Andrew P Morris, Andres Metspalu, Tõnu Esko, Reedik Mägi, Priit Palta
Improved imputation accuracy of rare and low-frequency variants using population-specific high-coverage WGS-based imputation reference panel
published pages: 869-876, ISSN: 1018-4813, DOI: 10.1038/EJHG.2017.51
European Journal of Human Genetics 25/7 2020-03-23
2017 Mate, Sebastian; Schüttler, Christina; Bott, Katrin; Knell, Christian; Kadioglu, Dennis; Eklund, Niina; Silander, Kaisa; Prokosch, Hans-Ulrich
Provision of a Terminology Service for Semantic Ontology Mapping – First Toolset Prototype
published pages: , ISSN: , DOI: 10.5281/zenodo.844009
2020-03-23
2018 Petr Holub, Florian Kohlmayer, Fabian Prasser, Michaela Th. Mayrhofer, Irene Schlünder, Gillian M. Martin, Sara Casati, Lefteris Koumakis, Andrea Wutte, Łukasz Kozera, Dominik Strapagiel, Gabriele Anton, Gianluigi Zanetti, Osman Ugur Sezerman, Maimuna Mendy, Dalibor Valík, Marialuisa Lavitrano, Georges Dagher, Kurt Zatloukal, GertJan B. van Ommen, Jan-Eric Litton
Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health
published pages: 97-105, ISSN: 1947-5535, DOI: 10.1089/bio.2017.0110
Biopreservation and Biobanking 16/2 2020-03-23
2017 Dmitry Shungin, Wei Q. Deng, Tibor V. Varga, Jian\'an Luan, Evelin Mihailov, Andres Metspalu, Andrew P. Morris, Nita G. Forouhi, Cecilia Lindgren, Patrik K. E. Magnusson, Nancy L. Pedersen, Göran Hallmans, Audrey Y. Chu, Anne E. Justice, Mariaelisa Graff, Thomas W. Winkler, Lynda M. Rose, Claudia Langenberg, L. Adrienne Cupples, Paul M. Ridker, Nicholas J. Wareham, Ken K. Ong, Ruth J. F. Loos, Daniel I. Chasman, Erik Ingelsson, Tuomas O. Kilpeläinen, Robert A. Scott, Reedik Mägi, Guillaume Paré, Paul W. Franks
Ranking and characterization of established BMI and lipid associated loci as candidates for gene-environment interactions
published pages: e1006812, ISSN: 1553-7404, DOI: 10.1371/journal.pgen.1006812
PLOS Genetics 13/6 2020-03-23
2016 Georges Dagher; Petr Holub; Michael Hummel; Anu Jalanko; Outi Törnwall; Kaisa Silander; Marialuisa Lavitrano; Kurt Zatloukal; Mats Hansson; Michaela Th. Mayrhofer; Maimuna Mendy; Philip Quinlan; Irene Schlünder
Harmonised Access Procedure to Samples and Data
published pages: , ISSN: , DOI: 10.5281/zenodo.823013
2020-03-23
2016 Anne Cambon-Thomsen
Ethical Governance Framework and Ethics Check for ADOPT BBMRI-­‐ERIC
published pages: , ISSN: , DOI: 10.5281/zenodo.823029
2020-03-23
2017 Reedik Mägi, Momoko Horikoshi, Tamar Sofer, Anubha Mahajan, Hidetoshi Kitajima, Nora Franceschini, Mark I. McCarthy, Andrew P. Morris
Trans-ethnic meta-regression of genome-wide association studies accounting for ancestry increases power for discovery and improves fine-mapping resolution
published pages: 3639-3650, ISSN: 0964-6906, DOI: 10.1093/hmg/ddx280
Human Molecular Genetics 26/18 2020-03-23
2017 Laramie Duncan, Zeynep Yilmaz, Helena Gaspar, Raymond Walters, Jackie Goldstein, Verneri Anttila, Brendan Bulik-Sullivan, Stephan Ripke, Laura Thornton, Anke Hinney, Mark Daly, Patrick F. Sullivan, Eleftheria Zeggini, Gerome Breen, Cynthia M. Bulik, Laramie Duncan, Zeynep Yilmaz, Héléna Gaspar, Raymond Walters, Jackie Goldstein, Verneri Anttila, Brendan Bulik-Sullivan, Stephan Ripke, Roger Adan, Lars Alfredsson, Tetsuya Ando, Ole Andreassen, Harald Aschauer, Jessica Baker, Jeffrey Barrett, Vladimir Bencko, Andrew Bergen, Wade Berrettini, Andreas Birgegård, Claudette Boni, Vesna Boraska Perica, Harry Brandt, Roland Burghardt, Laura Carlberg, Matteo Cassina, Carolyn Cesta, Sven Cichon, Maurizio Clementi, Sarah Cohen-Woods, Joni Coleman, Roger Cone, Philippe Courtet, Steven Crawford, Scott Crow, Jim Crowley, Unna Danner, Oliver Davis, Martina de Zwaan, George Dedoussis, Daniela Degortes, Janiece DeSocio, Danielle Dick, Dimitris Dikeos, Christian Dina, Bo Ding, Monika Dmitrzak-Weglarz, Elisa Docampo, Karin Egberts, Stefan Ehrlich, Geòrgia Escaramís, Tõnu Esko, Thomas Espeseth, Xavier Estivill, Angela Favaro, Fernando Fernández-Aranda, Manfred Fichter, Chris Finan, Krista Fischer, James Floyd, Manuel Föcker, Lenka Foretova, Monica Forzan, Caroline Fox, Christopher Franklin, Valerie Gaborieau, Steven Gallinger, Giovanni Gambaro, Ina Giegling, Fragiskos Gonidakis, Philip Gorwood, Monica Gratacos, Sébastien Guillaume, Yiran Guo, Hakon Hakonarson, Katherine Halmi, Rebecca Harrison, Konstantinos Hatzikotoulas, Joanna Hauser, Johannes Hebebrand, Sietske Helder, Judith Hendriks, Stefan Herms, Beate Herpertz-Dahlmann, Wolfgang Herzog, Christopher Hilliard, Laura Huckins, James Hudson, Julia Huemer, Hartmut Imgart, Hidetoshi Inoko, Sigrid Jall, Stephane Jamain, Vladimir Janout, Susana Jiménez-Murcia, Craig Johnson, Jenny Jordan, Antonio Julià, Anders Juréus, Gursharan Kalsi, Allan Kaplan, Jaakko Kaprio, Leila Karhunen, Andreas Karwautz, Martien Kas, Walter Kaye, Martin Kennedy, James Kennedy, Anna Keski-Rahkonen, Kirsty Kiezebrink, Youl-Ri Kim, Lars Klareskog, Kelly Klump, Gun Peggy Knudsen, Bobby Koeleman, Doris Koubek, Maria La Via, Mikael Landén, Stephanie Le Hellard, Marion Leboyer, Robert Levitan, Dong Li, Paul Lichtenstein, Lisa Lilenfeld, Jolanta Lissowska, Astri Lundervold, Pierre Magistretti, Mario Maj, Katrin Mannik, Sara Marsal, Debora Kaminska, Nicholas Martin, Morten Mattingsdal, Sara McDevitt, Peter McGuffin, Elisabeth Merl, Andres Metspalu, Ingrid Meulenbelt, Nadia Micali, James Mitchell, Karen Mitchell, Palmiero Monteleone, Alessio Maria Monteleone, Grant Montgomery, Preben Mortensen, Melissa Munn-Chernoff, Timo Müller, Benedetta Nacmias, Marie Navratilova, Ida Nilsson, Claes Norring, Ioanna Ntalla, Roel Ophoff, Julie O’Toole, Aarno Palotie, Jacques Pantel, Hana Papezova, Richard Parker, Dalila Pinto, Raquel Rabionet, Anu Raevuori, Andrzej Rajewski, Nicolas Ramoz, N. William Rayner, Ted Reichborn-Kjennerud, Valdo Ricca, Samuli Ripatti, Franziska Ritschel, Marion Roberts, Alessandro Rotondo, Dan Rujescu, Filip Rybakowski, Paolo Santonastaso, André Scherag, Stephen Scherer, Ulrike Schmidt, Nicholas Schork, Alexandra Schosser, Laura Scott, Jochen Seitz, Lenka Slachtova, Robert Sladek, P. Eline Slagboom, Margarita Slof-Op ’t Landt, Agnieszka Slopien, Tosha Smith, Nicole Soranzo, Sandro Sorbi, Lorraine Southam, Vidar Steen, Eric Strengman, Michael Strober, Jin Szatkiewicz, Neonila Szeszenia-Dabrowska, Ioanna Tachmazidou, Elena Tenconi, Alfonso Tortorella, Federica Tozzi, Janet Treasure, Matthias Tschöp, Artemis Tsitsika, Konstantinos Tziouvas, Annemarie van Elburg, Eric van Furth, Tracey Wade, Gudrun Wagner, Esther Walton, Hunna Watson, H-Erich Wichmann, Elisabeth Widen, D. Blake Woodside, Jack Yanovski, Shuyang Yao, Stephanie Zerwas, Stephan Zipfel, Laura Thornton, Anke Hinney, Mark Daly, Patrick F. Sullivan, Eleftheria Zeggini, Gerome Breen, Cynthia M. Bulik
Significant Locus and Metabolic Genetic Correlations Revealed in Genome-Wide Association Study of Anorexia Nervosa
published pages: 850-858, ISSN: 0002-953X, DOI: 10.1176/appi.ajp.2017.16121402
American Journal of Psychiatry 174/9 2020-03-23
2016 Marialuisa  Lavitrano,  Outi Törnwall
Procedure and checklist for on-­site visit evaluation
published pages: , ISSN: , DOI: 10.5281/zenodo.2598072
2020-03-23
2017 Michael H. Guo, Satish K. Nandakumar, Jacob C. Ulirsch, Seyedeh M. Zekavat, Jason D. Buenrostro, Pradeep Natarajan, Rany M. Salem, Roberto Chiarle, Mario Mitt, Mart Kals, Kalle Pärn, Krista Fischer, Lili Milani, Reedik Mägi, Priit Palta, Stacey B. Gabriel, Andres Metspalu, Eric S. Lander, Sekar Kathiresan, Joel N. Hirschhorn, Tõnu Esko, Vijay G. Sankaran
Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms
published pages: E327-E336, ISSN: 0027-8424, DOI: 10.1073/pnas.1619052114
Proceedings of the National Academy of Sciences 114/3 2020-03-23
2017 Anu Jalanko, Iiro Hämäläinen, Marialuisa Lavitrano, Kurt  Zatloukal , Gert‐Jan van Ommen, Michael Hisbergues,  Kyriacos Kyriacou, Annelies Debucquoy, Outi Törnwall
Best practice document for optimal usage of omics  technologies for biomarkers
published pages: , ISSN: , DOI: 10.5281/zenodo.2598093
2020-03-23
2017 Felix C. Tropf, S. Hong Lee, Renske M. Verweij, Gert Stulp, Peter J. van der Most, Ronald de Vlaming, Andrew Bakshi, Daniel A. Briley, Charles Rahal, Robert Hellpap, Anastasia N. Iliadou, Tõnu Esko, Andres Metspalu, Sarah E. Medland, Nicholas G. Martin, Nicola Barban, Harold Snieder, Matthew R. Robinson, Melinda C. Mills
Hidden heritability due to heterogeneity across seven populations
published pages: 757-765, ISSN: 2397-3374, DOI: 10.1038/s41562-017-0195-1
Nature Human Behaviour 1/10 2020-03-23
2017 Anu Jalanko, Andrea Wutte, Outi Törnwall and Kurt Zatlukal
Guideline for Biobanks to comply with EU in vitro diagnostics regulation
published pages: , ISSN: , DOI: 10.5281/zenodo.2597993
2020-03-23

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