Opendata, web and dolomites

BIOSTASIS SIGNED

BIOlogical SignaTures of AnhydrobioSIS via comparative transcriptomics on different evolutionary lineages within tardigrades

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 BIOSTASIS project word cloud

Explore the words cloud of the BIOSTASIS project. It provides you a very rough idea of what is the project "BIOSTASIS" about.

mentioned    lab    diversification    uses    physiological    respect    survival    shut    dating    post    phenomenon    utilized    revolves    forms    found    ddpcr    returning    evolutionary    severe    biology    university    tardigrade    superbly    transcriptome    stages    expression    signatures    levels    training    reflect    desiccation    biostasis    anhydrobiotic    organization    involve    groups    underlying    international    phases    gene    dehydration    genes    adaptations    consequently    profile    interestingly    transcription    implicated    taxon    sequencing    functional    chronology    single    suggest    establishing    phylum    copenhagen    position    possibly    strategy       differential    player    oslash    seems    constitute    world    reveal    situated    estimate    phylogenetic    species    model    lineage    rnaseq    group    anhydrobiosis    life    extensive    reversible    strategies    tardigrades    contradictory    organismic    data    molecules    gain    unpublished    molecular    bjerg    lineages    metabolism    mechanism    preliminary    biological    equipped   

Project "BIOSTASIS" data sheet

The following table provides information about the project.

Coordinator
KOBENHAVNS UNIVERSITET 

Organization address
address: NORREGADE 10
city: KOBENHAVN
postcode: 1165
website: www.ku.dk

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Denmark [DK]
 Total cost 200˙194 €
 EC max contribution 200˙194 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2016
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2018
 Duration (year-month-day) from 2018-02-01   to  2020-01-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    KOBENHAVNS UNIVERSITET DK (KOBENHAVN) coordinator 200˙194.00

Map

 Project objective

The current proposal revolves around the dehydration induced state, anhydrobiosis - a survival strategy found among a range of life-forms in face of severe desiccation. Anhydrobiosis is defined by a reversible shut-down of metabolism (biostasis) and it seems to involve adaptations at all levels of organismic organization. The current proposal uses tardigrades as a model to gain novel insight into molecular signatures underlying this unique biological phenomenon. Several molecules have been implicated in the anhydrobiotic mechanism; however, so far studies have been returning contradictory results with respect to the differential expression of genes in pre- and post-anhydrobiotic phases. Interestingly, our preliminary, unpublished data from Møbjerg lab suggest that there could be lineage specific strategies to anhydrobiosis. Consequently, I will use transcriptome sequencing (RNAseq) and ddPCR to reveal key-player genes and characterize functional pathways involved in i) different stages of anhydrobiosis of single tardigrade species and ii) between different evolutionary lineages within the phylum. The mentioned methods constitute the most important training element of my project. The overall goal of the proposal is to determine potential gene expression signatures for anhydrobiosis establishing a transcription profile that is i) characteristic of a particular physiological state and ii) that could possibly reflect the phylogenetic position of a taxon. My previous extensive experience on phylogenetic and molecular dating methods will, in this respect, be utilized to estimate the chronology of the possible diversification of anhydrobiosis within evolutionary lineages. My research will be conducted at the Møbjerg lab, which represents one of the world’s leading groups in the field of tardigrade biology. The group is situated at the Department of Biology, University Copenhagen, which is a superbly equipped institution with a high international profile.

 Publications

year authors and title journal last update
List of publications.
2019 Maria Kamilari, Aslak Jørgensen, Morten Schiøtt, Nadja Møbjerg
Comparative transcriptomics suggest unique molecular adaptations within tardigrade lineages
published pages: 607, ISSN: 1471-2164, DOI: 10.1186/s12864-019-5912-x
BMC Genomics 20/1 2020-03-23

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "BIOSTASIS" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "BIOSTASIS" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.3.2.)

RipGEESE (2020)

Identifying the ripples of gene regulation evolution in the evolution of gene sequences to determine when animal nervous systems evolved

Read More  

BIOplasma (2019)

Use flexible Tube Micro Plasma (FµTP) for Lipidomics

Read More  

CIRICC (2019)

Complicity: Individual Responsibility in Collective Contexts

Read More