Opendata, web and dolomites


guano-based monitoring of ecosystems – a novel approach to capture ecological processes underlying ecosystem health

Total Cost €


EC-Contrib. €






 EcoScan project word cloud

Explore the words cloud of the EcoScan project. It provides you a very rough idea of what is the project "EcoScan" about.

viral    vulnerable    insect    habitats    climate    protocols    load    integrity    light    time    taxon    levels    threatening    metabarcoding    survival    constructing    phenomena    patterns    accumulate    herbivores    latest    imbalances    unfeasible    metagenomics    zones    captured    secondary    aggregation    relation    sampling    taxa    substantially    logistically    financially    networks    contains    similarly    sophisticated    arguably    understudied    monitoring    pressing    mechanisms    survey    ecological    driving    health    microorganisms    individual    assemblages    form    layer    seasonal    abundance    cascade    layers    base    habitat    proof    viruses    illuminate    critical    plant    guano    distinguish    functioning    detection    diversity    climatic    ecosystem    collecting    environment    temporal    explore    life    species    ultimately    sequencing    biodiverse    shot    throughput    human    retrieve    localised    dna    plants    ingested    advantage    shed    eaten    pathogenic    weighted    associations    trophic    bat    stress    snap    earth    groups    natural    fungal    fungi   

Project "EcoScan" data sheet

The following table provides information about the project.


Organization address
address: Rue De L'Universite 147
city: PARIS CEDEX 07
postcode: 75338

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 184˙707 €
 EC max contribution 184˙707 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2019
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2020
 Duration (year-month-day) from 2020-06-01   to  2022-05-31


Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 


 Project objective

Climate change is arguably the most pressing challenge facing all life on earth, threatening human health, ecosystem integrity and the survival of vulnerable species and habitats. Monitoring ecosystem health is critical for the early detection of imbalances but current approaches to do so measure the end-state, not the mechanisms driving patterns of change. Plants form the base of ecosystem functioning and accumulate increased viral- and fungal load in response to climate-related stress. These viruses are ingested along with plant matter by insect herbivores who similarly have microorganisms and may be eaten by a secondary consumer such as a bat. In the current proposal, we take advantage of this natural aggregation through trophic levels by collecting bat guano which contains a snap-shot sample of the environment. Directly sampling the individual taxa in multi-trophic assemblages would be unfeasible both financially and logistically. We will then use the latest in high-throughput sequencing protocols in metabarcoding and viral metagenomics to retrieve plant viruses and fungi, in addition to insect, fungi and bat DNA, viruses and fungi. Temporal sampling across climatic zones and habitats will ensure that complex and seasonal ecosystem processes are captured. We will use novel, sophisticated methods in ecological analyses to explore taxon diversity, abundance and associations, and how these change over time. By constructing weighted and multi-layer networks we will illuminate the processes affecting seasonal ecosystem health in relation to habitat and climate. As such we will be able to distinguish between localised phenomena and effects which cascade across layers. Our proposal will substantially increase knowledge of biodiverse but understudied groups (non-pathogenic fungi and viruses), shed light on ecosystem processes and how they respond to climate change, and ultimately provide proof of concept results for ‘aggregation’ as a means to survey ecosystem health.

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The information about "ECOSCAN" are provided by the European Opendata Portal: CORDIS opendata.

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