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TRANSFR-Q SIGNED

Transcriptional RegulAtory Network controlling Strawberry Fruit Ripening and Quality

Total Cost €

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EC-Contrib. €

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Partnership

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 TRANSFR-Q project word cloud

Explore the words cloud of the TRANSFR-Q project. It provides you a very rough idea of what is the project "TRANSFR-Q" about.

breeding    plays    core    germplasm    hormone    variability    quality    traits    allelic    reverse    collection    stock    cultivars    regulation    climacteric    stage    firmness    programs    tissue    effect    map    variants    tilled    character    data    introgressed    fleshy    genes    shelf    model    silenced    chip    metabolomic    transfer    networks    expression    vesca    independent    plans    decades    sequenced    silencing    breakthroughs    contrast    alleles    genetics    serve    transcriptomic    tfs    genetic    candidate    ripening    significantly    flavour    strawberry    narrow    tunnelling    strategy    seq    regulatory    verify    fruit    integration    fruits    transfr    stably    wild    life    regulating    notable    precise    caused    tilling    relative    tomato    characters    gene    undergoes    crops    postharvest    identification    combined    first    varieties    lines    diploid    central    generating    transcription    fragaria    primarily    critical    ethylene    cultivated    agronomic    generation    unexploited    declined   

Project "TRANSFR-Q" data sheet

The following table provides information about the project.

Coordinator
UNIVERSIDAD DE MALAGA 

Organization address
address: AVDA CERVANTES, NUM. 2
city: MALAGA
postcode: 29016
website: www.uma.es

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Spain [ES]
 Project website http://www.ihsm.uma-csic.es/proyectos/69
 Total cost 1˙500˙000 €
 EC max contribution 1˙500˙000 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2014-STG
 Funding Scheme ERC-STG
 Starting year 2015
 Duration (year-month-day) from 2015-06-01   to  2021-05-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNIVERSIDAD DE MALAGA ES (MALAGA) coordinator 1˙500˙000.00

Map

 Project objective

Ripening is the critical step for the development of flavour quality in fruit. This character has significantly declined in many fleshy fruits over recent decades, primarily due to the focus of current breeding programs on agronomic traits such as production, firmness, and postharvest shelf life. This strategy has caused a tunnelling effect on genetic variability in many crops. This is particularly significant in strawberry, where current cultivars are derived from a narrow germplasm stock. A notable feature of strawberry fruit is that undergoes a non-climacteric ripening program independent of the hormone ethylene, in contrast to well studied climacteric fruits such as tomato, where ethylene plays a central role. Therefore, improving fruit flavour in present strawberry varieties requires two important breakthroughs: 1) a precise understanding of non-climacteric fruit ripening regulation that will allow the targeting of relevant quality genes, and 2) the identification of unexploited allelic variants from wild germplasm to be introgressed through the generation of novel breeding lines. The first objective will be achieved by (i) focusing on the sequenced, diploid Fragaria vesca, a wild relative of the cultivated strawberry that will serve as a model, (ii) identifying key transcription factors (TFs) regulating fruit ripening by generating a stage- and tissue-specific gene expression map, (iii) using a candidate gene approach and reverse genetics based on gene silencing and TILLING to verify the role of these TFs, and (iv) defining the gene regulatory networks controlling the ripening process via integration of transcriptomic, metabolomic and ChIP-Seq data obtained from the stably silenced and/or TILLED lines. Finally, TRANSFR-Q plans to use this knowledge, combined with the identification of novel alleles from a core collection of Fragaria germplasm, to transfer flavour quality characters into current strawberry cultivars.

 Publications

year authors and title journal last update
List of publications.
2019 José G. Vallarino, Catharina Merchante, José F. Sánchez‐Sevilla, María Angels Luis Balaguer, Delphine M. Pott, María T. Ariza, Ana Casañal, David Posé, Amalia Vioque, Iraida Amaya, Lothar Willmitzer, Roberto Solano, Rosangela Sozzani, Alisdair R. Fernie, Miguel A. Botella, James J. Giovannoni, Victoriano Valpuesta, Sonia Osorio
Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development
published pages: , ISSN: 1467-7644, DOI: 10.1111/pbi.13257
Plant Biotechnology Journal 2020-01-30
2019 Carlos Sánchez-Gómez, David Posé
Validación experimental de una red génica regulatoria específica de epidermis de frutos verdes de Fragaria vesca
published pages: , ISSN: , DOI:
II Congreso de Jóvenes Investigadores en Ciencias Agroalimentarias 2019-12-16
2019 Cristina Castillejo, Veronika Waurich, Henning Wagner, Rubén Ramos, Juan C. Triviño, Julie Caruana, Zhongchi Liu, David Posé, Tuomas Toivainen, Timo Hytönen, Klaus Olbricht, José F. Sánchez-Sevilla, Iraida Amaya
Independent mutations in a single locus, the transcriptional factor MYB10, control natural variation in fruit color among Fragaria species
published pages: , ISSN: , DOI:
FV 2019 Plant Biology - XXIII Meeting of the Spanish Society of Plant Physiology - XVI Spanish Portuguese Congress of Plant Physiology 2019-12-16
2019 María Urrutia, Victoriano Meco, Carmen Martín-Pizarro, Almudena Trapero, Jeremy Pillet, José Luis Rambla, Tuomas Toivainen, Antonio Granell, Timo Hytönen, David Posé
Aroma map in European woodland strawberry
published pages: , ISSN: , DOI:
Small Molecules in Plant Research 2019 2019-12-16
2019 María Urrutia, Victoriano Meco, José Luis Rambla, Tuomas Toivainen, Jeremy Pillet, Almudena Trapero, Carmen Martín-Pizarro, Carlos Sánchez-Gómez, Joaquín Salas, Antonio Granell, Timo Hytönen, David Posé.
Identification of candidate genes for methylketones content in a collection of European woodland strawberry
published pages: , ISSN: , DOI:
Small Molecules in Plant Research 2019 2019-12-16
2019 María Urrutia, Victoriano Meco, Almudena Trapero, Jeremy Pillet, José Luis Rambla, Tuomas Toivainen, Antonio Granell, Timo Hytönen, David Posé
Aroma map in European woodland strawberry
published pages: , ISSN: , DOI:
At the Forefront of Plant Research 2019 2019-12-16
2019 María Urrutia, Victoriano Meco, Almudena Trapero, Jeremy Pillet, José Luis Rambla, Tuomas Toivainen, Antonio Granell, Timo Hytönen, David Posé
Aroma map in European woodland strawberry
published pages: , ISSN: , DOI:
II Congreso de Jóvenes Investigadores en Ciencias Agroalimentarias 2019-12-16
2019 Carmen Martín-Pizarro, David Posé
CRISPR/Cas9-mediated editing of the TM6 MADS-box gene in the octoploid strawberry (Fragaria x ananassa)
published pages: , ISSN: , DOI:
At the Forefront of Plant Research 2019 2019-12-16
2019 Carmen Martín-Pizarro, Eva Lucas-Reina, Almudena Trapero, Victoriano Meco, Jeremy Pillet, David Posé
Identificación y caracterizaciónd de genes implicados en la maduración y la caidad de la fresa
published pages: , ISSN: , DOI:
Seminars at the Instituto de Hortofruticultura Subtropical y Mediterránea 2019-12-16
2017 Martín-Pizarro, Carmen; Posé, David
Genome Editing of the Octoploid Fragaria x ananassa Using the CRISPR/Cas9 System
published pages: , ISSN: , DOI:
XII SECIVTV Meeting: Plants in vitro dor the future 1 2019-09-27
2016 Martín-Pizarro, Carmen; Posé, David
Targeted gene modification in Fragaria vesca mediated by CRISPR/Cas9 system
published pages: , ISSN: , DOI:
XIII Reunión de BIología Molecular de Plantas (RBMP) 3 2019-09-27
2017 Martin-Pizarro, Carmen; Posé Padilla, David
Genome Editing of the Octoplid Fragaria x ananassa Using the CRISPR/Cas9 System
published pages: , ISSN: , DOI:
Plant Genome Editing & Genome Engineering 2 2019-09-27
2019 Carmen Martín-Pizarro, Eva Lucas-Reina, Almudena Trapero-Mozos, VIctoriano Meco, María A. De Luis Balaguer, José L. Rambla, Tuomas Toivainen, Rosangela Sozzani, Antonio Granell, Miguel A. Botella, Victoriano Valpuesta, Timo Hytönen, David Posé
Transcriptional Regulatory Network Controlling Strawberry Fruit Ripening and Quality
published pages: , ISSN: , DOI:
Plant & Animal Genome (PAG) XXVII 2019-09-27
2019 Carmen Martín-Pizarro, David Posé
Functional Analysis of TM6 MADS-Box Gene in the Octoploid Strawberry by CRISPR/Cas9 Directed Mutagenesis
published pages: , ISSN: , DOI:
Plant & Animal Genome (PAG) XXVII 2019-09-27
2018 Carmen Martín-Pizarro, David Posé
Genome Editing as a Tool for Fruit Ripening Manipulation
published pages: , ISSN: 1664-462X, DOI: 10.3389/fpls.2018.01415
Frontiers in Plant Science 9 2019-09-27
2018 Carmen Martín-Pizarro, Victoriano Meco, José G. Vallarino, Jeremy Pillet, Ana Casañal, Catharina Merchante, James Giovannoni, Sonia Osorio, Miguel Ángel Botella, Victoriano Valpuesta, David Posé
FaRIF Transcription Factor Plays a Key Role in the Regulation of Fruit Ripening in the Cultivated Strawberry Fragaria x ananassa
published pages: , ISSN: , DOI:
XIV REUNIÓN DE BIOLOGÍA MOLECULAR DE PLANTAS 2019-09-27
2018 Carmen Martín-Pizarro, Eva Lucas-Reina, Almudena Trapero-Mozos, Victoriano Meco, David Posé
Study of Transcriptional Regulatory Network Controlling Strawberry Fruit Ripening and Quality
published pages: , ISSN: , DOI:
XIV REUNIÓN DE BIOLOGÍA MOLECULAR DE PLANTAS 2019-09-27
2019 Cristina Castillejo, Julie Caruana, Veronica Waurich, Hennig Wagner, Rubén Ramos, José Vallarino, Nicolás Oiza, Pilar Muñoz del Rio, Juan C. Triviño, Sonia Osorio, Zhongchi Liu, David Posé, Tuomas Toivaiene, Timo Hytönene, José F. Sánchez Sevilla, Klaus Olbrich, Iraida Amaya
Natural Variation in Fruit Color Among Fragaria Species Explained by Independent Mutations in a Single Transcriptional Factor: MYB10
published pages: , ISSN: , DOI:
Plant & Animal Genome (PAG) XXVII 2019-09-27
2018 Carmen Martín-Pizarro, Juan Carlos Triviño, David Posé
Functional analysis of the TM6 MADS-box gene in the octoploid strawberry by CRISPR/Cas9-directed mutagenesis
published pages: , ISSN: 0022-0957, DOI: 10.1093/jxb/ery400
Journal of Experimental Botany 2019-09-27
2018 Carmen Martín-Pizarro, José Antonio Duarte-Conde, David Posé
Targeted Mutagenesis of FaTM6 in the Octoploid Strawberry (Fragaria x ananassa) Using the CRISPR/Cas9 System
published pages: , ISSN: , DOI:
XIV REUNIÓN DE BIOLOGÍA MOLECULAR DE PLANTAS 2019-09-27
2018 Eva Lucas-Reina, Almudena Trapero-Mozos, María Angels de Luis Balaguer, Carmen Martín-Pizarro, Martín Ramos-Alvelo, Rosangela Sozzani, Miguel Ángel Botella, Victoriano Valpuesta, David Posé
Deciphering Strawberry Ripening by Tissue Specific Gene Regulatory Networks
published pages: , ISSN: , DOI:
XIV REUNIÓN DE BIOLOGÍA MOLECULAR DE PLANTAS 2019-09-27
2018 Carmen Martín-Pizarro, Eva Lucas-Reina, Almudena Trapero-Mozos, Victoriano Meco, David Posé
Identificación y caracterización de genes implicados en la maduración y la calidad de la fresa
published pages: , ISSN: , DOI:
1er Congreso de Jóvenes Investigadores en Ciencias Agroalimentarias 2019-09-27
2018 Carmen Martín-Pizarro, David Posé
CRISPR/Cas9-mediated editing of the TM6 MADS-box gene in the octoploid strawberry (Fragaria x ananassa)
published pages: , ISSN: , DOI:
1er Congreso de Jóvenes Investigadores en Ciencias Agroalimentarias 2019-09-27
2017 José F. Sánchez-Sevilla, José G. Vallarino, Sonia Osorio, Aureliano Bombarely, David Posé, Catharina Merchante, Miguel A. Botella, Iraida Amaya, Victoriano Valpuesta
Gene expression atlas of fruit ripening and transcriptome assembly from RNA-seq data in octoploid strawberry (Fragaria × ananassa)
published pages: , ISSN: 2045-2322, DOI: 10.1038/s41598-017-14239-6
Scientific Reports 7/1 2019-09-27

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