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AEDNA SIGNED

Amorphous and Evolutionary DNA Nanotechnology

Total Cost €

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EC-Contrib. €

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Partnership

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 AEDNA project word cloud

Explore the words cloud of the AEDNA project. It provides you a very rough idea of what is the project "AEDNA" about.

optimize    programming    amorphous    nanoscaffolds    differentiation    communication    mixing    nanotechnology    molecular    hybrid    screen    components    quorum    materials    circuits    sensing    robotics    superstructure    creation    programmed    behaviors    active    ligand    macroscopic    tissues    sensor    arrangement    acids    bioprinting    identities    adaptive    differentiate    intelligent    cells    multicomponent    pattern    computation    gel    acid    sized    directed    pave    micromanipulation    nanocomponents    explores    soft    conceptual    self    diverse    first    microgels    populations    nanostructures    optimization    experiments    chemical    principles    intelligence    arranged    utilized    ing    individuals    evolutionary    3d    environmental    microfluidics    functional    collective    rna    scaled    contain    artificial    functions    techniques    sensitive    cell    evolution    nucleic    biocatalysis    aedna    dna    compartmentalization    compositions    actuator    directions    distributed    interacting    smart    biological   

Project "AEDNA" data sheet

The following table provides information about the project.

Coordinator
TECHNISCHE UNIVERSITAET MUENCHEN 

Organization address
address: Arcisstrasse 21
city: MUENCHEN
postcode: 80333
website: www.tu-muenchen.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Germany [DE]
 Project website https://www.groups.ph.tum.de/en/e14/
 Total cost 2˙157˙697 €
 EC max contribution 2˙157˙697 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2015-AdG
 Funding Scheme ERC-ADG
 Starting year 2016
 Duration (year-month-day) from 2016-06-01   to  2021-05-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    TECHNISCHE UNIVERSITAET MUENCHEN DE (MUENCHEN) coordinator 2˙157˙697.00

Map

 Project objective

Amorphous and evolutionary DNA nanotechnology (AEDNA) explores novel conceptual directions and applications for DNA nanotechnology, which are based on intelligent, DNA-programmed soft hybrid materials, and the utilization of evolutionary principles for the optimization of nucleic acid nanocomponents. Amorphous DNA nanotechnology first aims at the creation of cell-sized, DNA-programmed microgels – DNA cells – with sensor, computation, communication, and actuator functions. Interacting DNA cells will be arranged into chemical cell consortia and artificial tissues using microfluidics, micromanipulation and 3D bioprinting techniques. Spatially distributed chemical circuits will then be utilized to establish collective behaviors such as quorum sensing, pattern formation, and self-differentiation within these consortia and tissues. The approach will be further scaled up to produce multicomponent DNA gel compositions that become active and differentiate upon mixing. In evolutionary nanotechnology, techniques derived from directed molecular evolution experiments will be applied to optimize the arrangement of functional nucleic acids on DNA and RNA nanoscaffolds. Compartmentalization and microfluidics will be utilized to screen for nucleic acid nanostructures capable of superstructure formation, and also for the development of ligand-sensitive components for molecular programming. An evolutionary approach will then be applied to amorphous DNA cells, resulting in DNA cell populations which contain individuals with different molecular identities. The proposal will pave the way for the creation of macroscopic materials with DNA-programmed intelligence, resulting in novel applications for DNA nanotechnology and molecular programming in diverse fields such as environmental and biological sensing, biocatalysis, smart adaptive materials, and soft robotics.

 Publications

year authors and title journal last update
List of publications.
2019 Friedrich C. Simmel, Bernard Yurke, Hari R. Singh
Principles and Applications of Nucleic Acid Strand Displacement Reactions
published pages: 6326-6369, ISSN: 0009-2665, DOI: 10.1021/acs.chemrev.8b00580
Chemical Reviews 119 2019-09-02
2019 Alessandro Cecconello, Friedrich C. Simmel
Controlling Chirality across Length Scales using DNA
published pages: 1805419, ISSN: 1613-6810, DOI: 10.1002/smll.201805419
Small 15 2019-09-02
2019 Aradhana Chopra, Sandra Sagredo, Guido Grossi, Ebbe Andersen, Friedrich Simmel
Out-of-Plane Aptamer Functionalization of RNA Three-Helix Tiles
published pages: 507, ISSN: 2079-4991, DOI: 10.3390/nano9040507
Nanomaterials 9/4 2019-09-04
2017 Friedrich C. Simmel, Rebecca Schulman
Self-organizing materials built with DNA
published pages: 913-919, ISSN: 0883-7694, DOI: 10.1557/mrs.2017.271
MRS Bulletin 42/12 2019-06-13
2018 Kilian Vogele, Thomas Frank, Lukas Gasser, Marisa A. Goetzfried, Mathias W. Hackl, Stephan A. Sieber, Friedrich C. Simmel, Tobias Pirzer
Towards synthetic cells using peptide-based reaction compartments
published pages: , ISSN: 2041-1723, DOI: 10.1038/s41467-018-06379-8
Nature Communications 9/1 2019-02-25
2018 Lukas Aufinger, Friedrich C. Simmel
Artificial Gel-Based Organelles for Spatial Organization of Cell-Free Gene Expression Reactions
published pages: 17245-17248, ISSN: 1433-7851, DOI: 10.1002/anie.201809374
Angewandte Chemie International Edition 57/52 2019-02-25

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