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SURFInG SIGNED

StructURal and Functional dynamics of BrassIca napus polyploid Genome

Total Cost €

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EC-Contrib. €

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Partnership

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 SURFInG project word cloud

Explore the words cloud of the SURFInG project. It provides you a very rough idea of what is the project "SURFInG" about.

regulatory    traits    ecology    glucosinolate    events    methylation    agronomic    acquainted    transfer    avenues    amongst    phenotypic    platforms    hybridization    behavior    community    rape    speciation    expertise    reprogramming    genetic    napus    brassica    structural    extend    expression    cytogenetics    genome    phenotypically    mechanisms    succeed    species    interdisciplinary    overview    interface    extensive    lab    biologist    genotyping    polyploids    poorly    diversity    ultimately    combines    unravel    content    meiotic    biology    genomic    stabilization    responsible    edge    inherited    me    academically    rearrangements    track    silico    hybrid    ancient    crop    allopolyploidy    polyploid    fertility    doubling    france    regulation    parental    genomics    dynamics    private    network    intriguing    interspecific    metabolomics    functional    variation    dna    positioning    shown    contrasting    epi    evolutionary    oilseed    modify    throughput    host    plant    molecular    broad    situ    polyploidy    cutting    gene    transcriptomics    excellent   

Project "SURFInG" data sheet

The following table provides information about the project.

Coordinator
INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT 

Organization address
address: Rue De L'Universite 147
city: PARIS CEDEX 07
postcode: 75338
website: www.inra.fr

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 185˙076 €
 EC max contribution 185˙076 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2017
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2018
 Duration (year-month-day) from 2018-05-19   to  2020-05-18

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT FR (PARIS CEDEX 07) coordinator 185˙076.00

Map

 Project objective

Interspecific hybridization and genome doubling (allopolyploidy) are key factors in plant adaptation and speciation. These intriguing genomic processes cause extensive structural rearrangements and reprogramming of functional regulatory pathways inherited from parental species. Furthermore, hybrid species have shown broad phenotypic diversity. However, mechanisms responsible for genome stabilization after allopolyploidy remain poorly understood. The aim of my project is to provide an interdisciplinary overview of the effects of polyploidy on structural and functional dynamics in a major crop, oilseed rape (Brassica napus). This polyploid species is an excellent system to unravel the long-term and immediate evolutionary effects of ancient and recent polyploid events. In my project, I will use a novel approach that combines (epi)genomics and transcriptomics in phenotypically contrasting polyploids to investigate the role of structural and (epi)genetic regulation in genome stabilization. This work includes, amongst others, the transfer of knowledge to the host lab of cutting-edge molecular and in silico DNA methylation analysis methods. More specifically, I will determine the effects of structural and functional dynamics on B. napus (1) meiotic behavior and fertility, (2) gene expression and (3) glucosinolate content. My findings will open new avenues for using standing variation to modify and ultimately enhance agronomic traits. I have become a recognized evolutionary biologist working at the interface of ecology, genomics and molecular biology. From the expertise of the host lab and availability of technical platforms in situ, I will not only get acquainted with cytogenetics and metabolomics, but will increase my expertise in comparative genomics and in high throughput genotyping analyses. I will also extend my network towards the private sector and be integrated into a well-established European community, positioning me on track to succeed academically in France.

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The information about "SURFING" are provided by the European Opendata Portal: CORDIS opendata.

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