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SURFInG SIGNED

StructURal and Functional dynamics of BrassIca napus polyploid Genome

Total Cost €

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EC-Contrib. €

0

Partnership

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 SURFInG project word cloud

Explore the words cloud of the SURFInG project. It provides you a very rough idea of what is the project "SURFInG" about.

agronomic    succeed    inherited    track    hybridization    ultimately    structural    traits    phenotypically    rape    ancient    mechanisms    variation    events    gene    private    species    brassica    biologist    lab    academically    expertise    parental    fertility    content    expression    transfer    silico    biology    oilseed    polyploid    throughput    functional    responsible    positioning    interspecific    regulatory    broad    cutting    polyploids    methylation    allopolyploidy    phenotypic    molecular    edge    situ    plant    genomic    hybrid    interdisciplinary    extensive    napus    diversity    excellent    evolutionary    crop    community    shown    genetic    genome    network    speciation    reprogramming    meiotic    poorly    genotyping    intriguing    overview    behavior    platforms    transcriptomics    glucosinolate    interface    france    contrasting    unravel    doubling    dna    combines    epi    rearrangements    genomics    extend    dynamics    amongst    modify    metabolomics    regulation    host    avenues    polyploidy    ecology    cytogenetics    me    acquainted    stabilization   

Project "SURFInG" data sheet

The following table provides information about the project.

Coordinator
INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT 

Organization address
address: Rue De L'Universite 147
city: PARIS CEDEX 07
postcode: 75338
website: www.inra.fr

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 185˙076 €
 EC max contribution 185˙076 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2017
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2018
 Duration (year-month-day) from 2018-05-19   to  2020-05-18

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT FR (PARIS CEDEX 07) coordinator 185˙076.00

Map

 Project objective

Interspecific hybridization and genome doubling (allopolyploidy) are key factors in plant adaptation and speciation. These intriguing genomic processes cause extensive structural rearrangements and reprogramming of functional regulatory pathways inherited from parental species. Furthermore, hybrid species have shown broad phenotypic diversity. However, mechanisms responsible for genome stabilization after allopolyploidy remain poorly understood. The aim of my project is to provide an interdisciplinary overview of the effects of polyploidy on structural and functional dynamics in a major crop, oilseed rape (Brassica napus). This polyploid species is an excellent system to unravel the long-term and immediate evolutionary effects of ancient and recent polyploid events. In my project, I will use a novel approach that combines (epi)genomics and transcriptomics in phenotypically contrasting polyploids to investigate the role of structural and (epi)genetic regulation in genome stabilization. This work includes, amongst others, the transfer of knowledge to the host lab of cutting-edge molecular and in silico DNA methylation analysis methods. More specifically, I will determine the effects of structural and functional dynamics on B. napus (1) meiotic behavior and fertility, (2) gene expression and (3) glucosinolate content. My findings will open new avenues for using standing variation to modify and ultimately enhance agronomic traits. I have become a recognized evolutionary biologist working at the interface of ecology, genomics and molecular biology. From the expertise of the host lab and availability of technical platforms in situ, I will not only get acquainted with cytogenetics and metabolomics, but will increase my expertise in comparative genomics and in high throughput genotyping analyses. I will also extend my network towards the private sector and be integrated into a well-established European community, positioning me on track to succeed academically in France.

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The information about "SURFING" are provided by the European Opendata Portal: CORDIS opendata.

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