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SURFInG SIGNED

StructURal and Functional dynamics of BrassIca napus polyploid Genome

Total Cost €

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EC-Contrib. €

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Partnership

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 SURFInG project word cloud

Explore the words cloud of the SURFInG project. It provides you a very rough idea of what is the project "SURFInG" about.

platforms    unravel    track    throughput    genomic    gene    transfer    mechanisms    genomics    methylation    transcriptomics    interspecific    phenotypic    stabilization    interface    host    reprogramming    biologist    meiotic    hybridization    extensive    hybrid    regulatory    polyploid    ecology    dynamics    structural    france    community    interdisciplinary    broad    rearrangements    polyploids    private    dna    content    shown    extend    polyploidy    molecular    genome    expertise    napus    ultimately    cytogenetics    amongst    phenotypically    brassica    modify    positioning    speciation    intriguing    variation    responsible    excellent    diversity    situ    lab    doubling    succeed    me    parental    silico    behavior    glucosinolate    genetic    overview    metabolomics    allopolyploidy    ancient    acquainted    fertility    functional    combines    regulation    edge    cutting    poorly    species    traits    evolutionary    contrasting    network    events    academically    plant    expression    rape    avenues    oilseed    inherited    crop    biology    genotyping    epi    agronomic   

Project "SURFInG" data sheet

The following table provides information about the project.

Coordinator
INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT 

Organization address
address: Rue De L'Universite 147
city: PARIS CEDEX 07
postcode: 75338
website: www.inra.fr

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 185˙076 €
 EC max contribution 185˙076 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2017
 Funding Scheme MSCA-IF-EF-ST
 Starting year 2018
 Duration (year-month-day) from 2018-05-19   to  2020-05-18

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT FR (PARIS CEDEX 07) coordinator 185˙076.00

Map

 Project objective

Interspecific hybridization and genome doubling (allopolyploidy) are key factors in plant adaptation and speciation. These intriguing genomic processes cause extensive structural rearrangements and reprogramming of functional regulatory pathways inherited from parental species. Furthermore, hybrid species have shown broad phenotypic diversity. However, mechanisms responsible for genome stabilization after allopolyploidy remain poorly understood. The aim of my project is to provide an interdisciplinary overview of the effects of polyploidy on structural and functional dynamics in a major crop, oilseed rape (Brassica napus). This polyploid species is an excellent system to unravel the long-term and immediate evolutionary effects of ancient and recent polyploid events. In my project, I will use a novel approach that combines (epi)genomics and transcriptomics in phenotypically contrasting polyploids to investigate the role of structural and (epi)genetic regulation in genome stabilization. This work includes, amongst others, the transfer of knowledge to the host lab of cutting-edge molecular and in silico DNA methylation analysis methods. More specifically, I will determine the effects of structural and functional dynamics on B. napus (1) meiotic behavior and fertility, (2) gene expression and (3) glucosinolate content. My findings will open new avenues for using standing variation to modify and ultimately enhance agronomic traits. I have become a recognized evolutionary biologist working at the interface of ecology, genomics and molecular biology. From the expertise of the host lab and availability of technical platforms in situ, I will not only get acquainted with cytogenetics and metabolomics, but will increase my expertise in comparative genomics and in high throughput genotyping analyses. I will also extend my network towards the private sector and be integrated into a well-established European community, positioning me on track to succeed academically in France.

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The information about "SURFING" are provided by the European Opendata Portal: CORDIS opendata.

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