Explore the words cloud of the AlgDates project. It provides you a very rough idea of what is the project "AlgDates" about.
The following table provides information about the project.
|Coordinator Country||France [FR]|
|Total cost||173˙076 €|
|EC max contribution||173˙076 € (100%)|
1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
|Duration (year-month-day)||from 2016-07-01 to 2018-06-30|
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|1||UNIVERSITE PARIS-SUD||FR (ORSAY CEDEX)||coordinator||173˙076.00|
Eukaryotic algae evolutionary history is still fairly unknown. Thanks to state-of-the-art evolutionary models, next-gen sequencing and high computational capabilities, we are going to shed some light on the matter. Corallinales (red algae) and Dasycladales (green algae) are two extant living groups of calcareous algae with a rich fossil record (~140 and ~500 myr respectively). The lack of sufficient molecular data for these groups makes impossible to use such species in eukaryotic phylogeny and dating studies. This project has been planed to cover 2 objectives or evolutionary questions: The 1st objective aims 1) to generate de novo transcriptomic data for about 10 species corresponding to different Corallinales and Dasycladales lineages in order to perform phylogenomic analyses with 2 established datasets (one of 200 nuclear-coding plastid markers, and the other with 258 non-plastid genes) and the broadest possible eukaryotic taxonomic sampling; and 2) to perform molecular clock analyses using known fossil calibrations and hence provide robust divergence times for the whole eukaryotic tree but focusing on primary and secondary plastid endosymbiotic acquisitions. For both post- phylogenomic analyses (dating and divergence steps), already established collaborations will ensure proper method implementation. Using the results from the first objective, the 2nd one aims 1) to track history of plastid evolution (plastid-based dataset) comparing it with deep eukaryotic speciation events (non-plastid marker tree); and 2) to estimate diversification rates in distinct photosynthetic lineages in order to find if rate shifts correlate among them. AlgDates will allow us to establish the order, timing and correlation of events in such deep evolutionary transitions, but the knowledge acquired during this project will also provide information regarding reef formation and evolution, which can be useful when addressing or predicting calcareous ecosystem adaptations to climate change.
|year||authors and title||journal||last update|
Sergey A. Karpov, Victoria S. Tcvetkova, Maria A. Mamkaeva, GuifrÃ© Torruella, HÃ©lÃ¨ne Timpano, David Moreira, Karomat S. Mamanazarova, PurificaciÃ³n LÃ³pez-GarcÃa
Morphological and Genetic Diversity of Opisthosporidia: New Aphelid Paraphelidium tribonemae gen. et sp. nov.
published pages: 204-212, ISSN: 1066-5234, DOI: 10.1111/jeu.12352
|Journal of Eukaryotic Microbiology 64/2||2019-06-14|
David LÃ³pez-EscardÃ³, PurificaciÃ³n LÃ³pez-GarcÃa, David Moreira, IÃ±aki Ruiz-Trillo, GuifrÃ© Torruella
Parvularia atlantis gen. et sp. nov., a Nucleariid Filose Amoeba (Holomycota, Opisthokonta)
published pages: 170-179, ISSN: 1066-5234, DOI: 10.1111/jeu.12450
|Journal of Eukaryotic Microbiology 65/2||2019-06-13|
David Bass, Lucas Czech, Bryony A. P. Williams, CÃ©dric Berney, Micah Dunthorn, Frederic MahÃ©, GuifrÃ© Torruella, Grant D. Stentiford, Tom A. Williams
Clarifying the Relationships between Microsporidia and Cryptomycota
published pages: , ISSN: 1066-5234, DOI: 10.1111/jeu.12519
|Journal of Eukaryotic Microbiology||2019-06-13|
Xavier Grau-BovÃ©, GuifrÃ© Torruella, Stuart Donachie, Hiroshi Suga, Guy Leonard, Thomas A Richards, IÃ±aki Ruiz-Trillo
Dynamics of genomic innovation in the unicellular ancestry of animals
published pages: , ISSN: 2050-084X, DOI: 10.7554/eLife.26036
Sergey A. Karpov, GuifrÃ© Torruella, David Moreira, Maria A. Mamkaeva, PurificaciÃ³n LÃ³pez-GarcÃa
Molecular Phylogeny of Paraphelidium letcheri sp. nov. (Aphelida, Opisthosporidia)
published pages: 573-578, ISSN: 1066-5234, DOI: 10.1111/jeu.12389
|Journal of Eukaryotic Microbiology 64/5||2019-06-13|
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