Opendata, web and dolomites

ProstOmics SIGNED

'Tissue is the issue': a multi-omics approach to improve prostate cancer diagnosis

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 ProstOmics project word cloud

Explore the words cloud of the ProstOmics project. It provides you a very rough idea of what is the project "ProstOmics" about.

resolution    limitations    inspire    inter    recurrence    health    economy    tissue    slices    snap    metabolite    maps    cohorts    frozen    shot    clinic    biobanks    succinate    care    explore    1000    human    strategies    performed    speed    life    fundamentally    techniques    guided    prostate    scientific    view    spatial    transcriptomics    correct    made    citrate    immune    technologies    genomics    omics    rapiflex    clinical    tissuetyper    edge    quality    cutting    biopsies    reveal    fresh    molecular    imaging    connection    stage    personalize    data    prostatectomy    tissues    biological    follow    treatment    pca    tools    disciplinary    suggested    diagnostic    metabolic    innovative    heterogeneity    100    vivo    polyamines    matched    analyze    platforms    spectroscopic    biomarkers    cell    mechanisms    metabolomics    mr    histopathology    burden    patients    overtreatment       samples    zinc    diagnosis    community    maldi    markers    protocol    cancer    prognostic   

Project "ProstOmics" data sheet

The following table provides information about the project.

Coordinator
NORGES TEKNISK-NATURVITENSKAPELIGE UNIVERSITET NTNU 

Organization address
address: HOGSKOLERINGEN 1
city: TRONDHEIM
postcode: 7491
website: www.ntnu.no

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Norway [NO]
 Total cost 1˙500˙000 €
 EC max contribution 1˙500˙000 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2017-STG
 Funding Scheme ERC-STG
 Starting year 2018
 Duration (year-month-day) from 2018-02-01   to  2023-01-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    NORGES TEKNISK-NATURVITENSKAPELIGE UNIVERSITET NTNU NO (TRONDHEIM) coordinator 1˙500˙000.00

Map

 Project objective

Overtreatment in prostate cancer (PCa) is a burden for health care economy and for quality of life. Correct diagnosis of early stage PCa is challenging given the limitations of the currently available clinical tools and the biological understanding of PCa. In this inter-disciplinary project, I propose an innovative approach enabling several cutting-edge ‘omics’ technologies (spatial metabolomics, genomics, transcriptomics) as well as histopathology to be performed on the same tissue sample. My goal is to reveal the molecular mechanisms of novel, but also promising metabolite biomarkers (citrate, polyamines, succinate and zinc) and their connection to recurrence, tissue heterogeneity and immune responses in complex human tissues. Such markers can personalize PCa diagnosis, open up new treatment strategies and fundamentally change the view of how to analyze tissue samples in the future. Furthermore, I want to demonstrate that citrate and polyamines are reliable prognostic markers that can be analyzed both in tissue and in patients in vivo by MR spectroscopic imaging. This work is made possible by the availability of high-quality fresh frozen tissue biobanks of prostatectomy biopsies with 5-10 years of follow-up data (N=1000)/slices (N=1000) and targeted in vivo snap-shot biopsies from clinical MR guided procedures (N=100). Among other techniques, I will implement high speed MALDI imaging (RapifleX MALDI TissueTyper) to the multi-omics protocol to study the spatial distribution and provide high resolution metabolic maps for each cell type, and which can be matched to both histopathology and MR Imaging. Multi-disciplinary platforms on large cohorts are needed to explore the clinical potential of the suggested molecular mechanisms. I expect that this ambitious proposal will address the diagnostic challenges of PCa and will further inspire the clinic and scientific community to follow the multi-omics approach within diagnosis and cancer research.

 Publications

year authors and title journal last update
List of publications.
2018 Kirsten M. Selnæs, Brage Krüger-Stokke, Mattijs Elschot, Frode Willoch, Øystein Størkersen, Elise Sandsmark, Siver A. Moestue, May-Britt Tessem, Dag Halvorsen, Eirik Kjøbli, Anders Angelsen, Sverre Langørgen, Helena Bertilsson, Tone F. Bathen
18F-Fluciclovine PET/MRI for preoperative lymph node staging in high-risk prostate cancer patients
published pages: 3151-3159, ISSN: 0938-7994, DOI: 10.1007/s00330-017-5213-1
European Radiology 28/8 2019-10-03
2018 Guro F. Giskeødegård, Torfinn S. Madssen, Leslie R. Euceda, May-Britt Tessem, Siver A. Moestue, Tone F. Bathen
NMR-based metabolomics of biofluids in cancer
published pages: e3927, ISSN: 0952-3480, DOI: 10.1002/nbm.3927
NMR in Biomedicine 2019-10-03
2018 Maria K. Andersen, Kjersti Rise, Guro F. Giskeødegård, Elin Richardsen, Helena Bertilsson, Øystein Størkersen, Tone F. Bathen, Morten Rye, May-Britt Tessem
Integrative metabolic and transcriptomic profiling of prostate cancer tissue containing reactive stroma
published pages: , ISSN: 2045-2322, DOI: 10.1038/s41598-018-32549-1
Scientific Reports 8/1 2019-10-03
2019 Guro F. Giskeødegård, Trygve Andreassen, Helena Bertilsson, May-Britt Tessem, Tone F. Bathen
The effect of sampling procedures and day-to-day variations in metabolomics studies of biofluids
published pages: 93-102, ISSN: 0003-2670, DOI: 10.1016/j.aca.2019.07.026
Analytica Chimica Acta 1081 2019-10-03

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "PROSTOMICS" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "PROSTOMICS" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.1.1.)

evolSingleCellGRN (2019)

Constraint, Adaptation, and Heterogeneity: Genomic and single-cell approaches to understanding the evolution of developmental gene regulatory networks

Read More  

IMMUNOTHROMBOSIS (2019)

Cross-talk between platelets and immunity - implications for host homeostasis and defense

Read More  

RODRESET (2019)

Development of novel optogenetic approaches for improving vision in macular degeneration

Read More