Opendata, web and dolomites

GENE-SWitCH SIGNED

The regulatory GENomE of SWine and CHicken: functional annotation during development

Total Cost €

0

EC-Contrib. €

0

Partnership

0

Views

0

 GENE-SWitCH project word cloud

Explore the words cloud of the GENE-SWitCH project. It provides you a very rough idea of what is the project "GENE-SWitCH" about.

resolution    annotation    perturbations    edge    tissues    variation    activation    considerably    academic    evaluation    varies    diet    world    persist    excellence    switch    productions    audience    genome    sustainable    qtl    functional    breeding    data    genomes    space    environmental    sectors    faang    paving    annotations    translation    full    epigenetic    sequences    true    pioneered    outreach    biotech    models    species    underpinning    validated    dynamics    predictive    panel    representing    ongoing    status    synergy    cutting    pan    co    community    creation    commercial    until    maternal    shared    life    embryo    animal    genomic    gene    populations    adult    global    effort    poultry    benefit    monogastric    strategies    time    expression    nutritional    epigenome    post    innovative    conform    farm    industry    stakeholders    genetic    datasets    brings    weaning    standards    pig    fetus    add    chicken    valuable    influence    pigs    switches    integrate    plan   

Project "GENE-SWitCH" data sheet

The following table provides information about the project.

Coordinator
INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT 

Organization address
address: Rue De L'Universite 147
city: PARIS CEDEX 07
postcode: 75338
website: www.inra.fr

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country France [FR]
 Total cost 5˙999˙891 €
 EC max contribution 5˙999˙886 € (100%)
 Programme 1. H2020-EU.3.2.1.1. (Increasing production efficiency and coping with climate change, while ensuring sustainability and resilience)
2. H2020-EU.3.2.3.1. (Developing sustainable and environmentally-friendly fisheries)
 Code Call H2020-SFS-2018-2
 Funding Scheme RIA
 Starting year 2019
 Duration (year-month-day) from 2019-07-01   to  2023-06-30

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    INSTITUT NATIONAL DE RECHERCHE POUR L'AGRICULTURE, L'ALIMENTATION ET L'ENVIRONNEMENT FR (PARIS CEDEX 07) coordinator 1˙195˙073.00
2    WAGENINGEN UNIVERSITY NL (WAGENINGEN) participant 971˙783.00
3    THE UNIVERSITY OF EDINBURGH UK (EDINBURGH) participant 905˙523.00
4    EUROPEAN MOLECULAR BIOLOGY LABORATORY DE (HEIDELBERG) participant 710˙478.00
5    DIAGENODE BE (SERAING) participant 548˙000.00
6    INSTITUT DE RECERCA I TECNOLOGIA AGROALIMENTARIES ES (CALDES DE MONTBUI BARCELONA) participant 509˙992.00
7    HENDRIX GENETICS RESEARCH,TECHNOLOGY & SERVICES BV NL (BOXMEER) participant 343˙743.00
8    UPPSALA UNIVERSITET SE (UPPSALA) participant 287˙500.00
9    INRA TRANSFERT SAS FR (PARIS) participant 209˙750.00
10    EUROPEAN FORUM OF FARM ANIMAL BREEDERS NL (WAGENINGEN) participant 197˙357.00
11    FEDERAZIONE EUROPEA DI ZOOTECNICA IT (ROMA) participant 120˙687.00

Map

 Project objective

GENE-SWitCH aims to deliver new underpinning knowledge on the functional genomes of two main monogastric farm species (pig and chicken) and to enable immediate translation to the pig and poultry sectors. The activation status of functional genome sequences varies across time and space, and in response to environmental perturbations. In full coordination and synergy with global effort and ongoing projects of the Functional Annotation of ANimal Genomes (FAANG) community, we will characterize the dynamics (“switches”) of the functional genome from embryo (chicken) and fetus (pig) to adult life by targeting a panel of tissues relevant to sustainable production. New expression QTL data in pigs and existing high-resolution QTL data in chicken will be used for developing innovative genomic predictive models that integrate functional annotations, and these models will be validated in commercial pig and poultry populations. In addition, nutritional epigenetic data will allow evaluation of the influence of maternal diet on the epigenome of the pig fetus and whether such effects persist until post-weaning. These open-shared datasets will conform fully with FAANG standards and add valuable knowledge on genetic and epigenetic variation of functional elements to FAANG. A comprehensive plan of dissemination and outreach activities to a large audience of stakeholders will be implemented. The GENE-SWitCH consortium brings together partners representing pan-European excellence (including the academic institutions which pioneered FAANG) and world-leading animal breeding and biotech industry in a true co-creation effort. Overall, GENE-SWitCH will contribute to the global FAANG effort considerably, demonstrate how functional annotation of genomes can foster the advancement of genomic selection for immediate benefit to the breeding industry, and produce cutting-edge research paving the way to new studies and strategies for sustainable productions.

 Deliverables

List of deliverables.
GENE-SWitCH Data Management Plan Open Research Data Pilot 2020-04-25 13:33:44
Outreach, dissemination, and training plan Documents, reports 2020-04-25 13:33:44

Take a look to the deliverables list in detail:  detailed list of GENE-SWitCH deliverables.

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "GENE-SWITCH" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an  email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "GENE-SWITCH" are provided by the European Opendata Portal: CORDIS opendata.

More projects from the same programme (H2020-EU.3.2.1.1.;H2020-EU.3.2.3.1.)

AQUA-FAANG (2019)

Advancing European Aquaculture by Genome Functional Annotation

Read More  

BovReg (2019)

BovReg - Identification of functionally active genomic features relevant to phenotypic diversity and plasticity in cattle

Read More  

GENE-SWitCH (2019)

The regulatory GENomE of SWine and CHicken: functional annotation during development

Read More